RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MGST2Q99735 147 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 NPFFR1Q9GZQ6 430 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 TRAV24A0A0B4J272 114 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 A6NDN8 102 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 HTR1DP28221 377 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 RAB31Q13636 194 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 GABRA6Q16445 453 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 TMEM97Q5BJF2 176 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 BHLHA15Q7RTS1 189 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-206ENST00000428313 METTL7AQ9H8H3 244 aa13.37□□□□□ -0.27
C9orf3-206ENST00000428313 A0A1W2PQF6 199 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 CA3P07451 260 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 GFERP55789 205 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 PLP1P60201 277 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 C1orf61Q13536 156 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 MIC13Q5XKP0 118 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 CFAP161Q6P656 301 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 OR2K2Q8NGT1 345 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 CHCHD1Q96BP2 118 aaKnown RBP13.36□□□□□ -0.27
C9orf3-206ENST00000428313 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 SSBP4Q9BWG4 385 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-206ENST00000428313 PLA2G2FQ9BZM2 168 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 FGF23Q9GZV9 251 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-206ENST00000428313 KCNIP1Q9NZI2 227 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 TNRC6BQ9UPQ9 1833 aaKnown RBP13.36□□□□□ -0.27
C9orf3-206ENST00000428313 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 LILRA5A6NI73 299 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 C21orf140B9A014 251 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 COX8AP10176 69 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 C2orf91Q6ZV80 131 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 CLCF1Q9UBD9 225 aa13.36□□□□□ -0.27
C9orf3-206ENST00000428313 SMPD2O60906 423 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 IGLV2-8P01709 118 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 FASLGP48023 281 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 GPM6AP51674 278 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 RPL8P62917 257 aaKnown RBP13.35□□□□□ -0.27
C9orf3-206ENST00000428313 CEACAM21Q3KPI0 293 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 WDR82Q6UXN9 313 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 BPIFA4PQ86YQ2 179 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 URB1-AS1Q96HZ7 61 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 C1QTNF5Q9BXJ0 243 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 OR2H1Q9GZK4 316 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 PILRBQ9UKJ0 227 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 SEC16AO15027 2179 aa13.35□□□□□ -0.27
C9orf3-206ENST00000428313 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 PSMB11A5LHX3 300 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 CATR1Q13166 79 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 C9orf135Q5VTT2 229 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF645Q8N7E2 425 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 FADS6Q8N9I5 356 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-206ENST00000428313 OR2V2Q96R30 315 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 PRDM14Q9GZV8 571 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 SLC25A10Q9UBX3 287 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-206ENST00000428313 ZIC3O60481 467 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 NEURL1O76050 574 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 EFNB3Q15768 340 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 SHISA6Q6ZSJ9 500 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 H2BFWTQ7Z2G1 175 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 OR10AG1Q8NH19 301 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 IGF2BP2-AS1Q96M15 143 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 ZNF48Q96MX3 618 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-206ENST00000428313 WDR54Q9H977 334 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 TMEM167BQ9NRX6 74 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 SERTAD4Q9NUC0 356 aa13.34□□□□□ -0.27
C9orf3-206ENST00000428313 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 OR5AL1P0C617 328 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
C9orf3-206ENST00000428313 PPOXP50336 477 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 PCBD1P61457 104 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 ZNF816Q0VGE8 651 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-206ENST00000428313 EIF4EBP1Q13541 118 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-206ENST00000428313 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 CT55Q8WUE5 264 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 MBD6Q96DN6 1003 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
C9orf3-206ENST00000428313 MYO7AQ13402 2215 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 SPTY2D1-AS1A0A0U1RR47 76 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 TMEM189A5PLL7 270 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 HSD52Q0P140 79 aa13.33□□□□□ -0.28
C9orf3-206ENST00000428313 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 RHBDL1O75783 438 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 MFAP2P55001 183 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 FAM231DQ6ZW35 169 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 ATP5L2Q7Z4Y8 100 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 VSTM2AQ8TAG5 236 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 H1FXQ92522 213 aaKnown RBP13.32□□□□□ -0.28
C9orf3-206ENST00000428313 TRIB1Q96RU8 372 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms