RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 GSG1Q2KHT4 349 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 PLET1Q6UQ28 207 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 C9orf62Q8N4C0 152 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 CISHQ9NSE2 258 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 VPS13DQ5THJ4 4388 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 FAM236DA0A1B0GTK5 79 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 K7ERU9 68 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ENSAO43768 121 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 GABARAPO95166 117 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 PRSS2P07478 247 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 FAM236CP0DP71 79 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ATF1P18846 271 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 NPY1RP25929 384 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 MDH2P40926 338 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 RPS11P62280 158 aaKnown RBP eCLIP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 SLC35A2P78381 396 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ARFRP1Q13795 201 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 KIAA0040Q15053 153 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 VMACQ2NL98 169 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 Q6YL49 198 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 C1QL2Q7Z5L3 287 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 EXOC3-AS1Q8N2X6 119 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF418Q8TF45 676 aaPredicted RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 SFT2D1Q8WV19 159 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 CYGBQ8WWM9 190 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 FCRL1Q96LA6 429 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 LINC00597Q9H2U6 94 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 EXOSC4Q9NPD3 245 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 KCNIP2Q9NS61 270 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 MTFP1Q9UDX5 166 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 U3KQ87 197 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 CROCCQ5TZA2 2017 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 XIRP2A4UGR9 3374 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 hCG_1818297A0A087WSY0 165 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 FABP5P3A8MUU1 101 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 H7BYZ3 331 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 H7C1C5 153 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 HIST1H1BP16401 226 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF30P17039 623 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 IGHV1-2P23083 117 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 POLR2IP36954 125 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF138P52744 262 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 LCN6P62502 163 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 BTG2P78543 158 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 DEFB103AP81534 67 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 EGFEM1PQ0D2K5 195 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 PSG7Q13046 419 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 GPR18Q14330 331 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ODF3L2Q3SX64 289 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF404Q494X3 552 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ATP6AP1LQ52LC2 224 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 NHLRC3Q5JS37 347 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 C1orf100Q5SVJ3 147 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ANKRD22Q5VYY1 191 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 CXCL17Q6UXB2 119 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 RNF165Q6ZSG1 346 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF720Q7Z2F6 126 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 MRPL55Q7Z7F7 128 aaKnown RBP2.36□□□□□ -2.03
RGPD1-203ENST00000428128 OR4M1Q8NGD0 313 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 OR5K1Q8NHB7 308 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 LMX1AQ8TE12 382 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 PHYHIPLQ96FC7 376 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 MARCH5Q9NX47 278 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 KCNIP1Q9NZI2 227 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 SIGLEC7Q9Y286 467 aa2.36□□□□□ -2.03
RGPD1-203ENST00000428128 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 PLAC8L1A1L4L8 177 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 IFITM5A6NNB3 132 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 A8MWP6 167 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 LEUTXA8MZ59 168 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 INAFM1C9JVW0 142 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 F6UB75 175 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 AIPO00170 330 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF207O43670 478 aaKnown RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 IGHV3-48P01763 117 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 CPMP14384 443 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 OR10J1P30954 320 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 HLA-DRB3P79483 266 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 MRPS10P82664 201 aaKnown RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 GNA12Q03113 381 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 GUCA2BQ16661 112 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 RSBN1Q5VWQ0 802 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 TGIF2LYQ8IUE0 185 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SGPP2Q8IWX5 399 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 TMEM178AQ8NBL3 297 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 OR13C8Q8NGS7 320 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF564Q8TBZ8 553 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 CT55Q8WUE5 264 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 KLF6Q99612 283 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 LRRC61Q9BV99 259 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SLC29A3Q9BZD2 475 aa2.35□□□□□ -2.03
RGPD1-203ENST00000428128 SLIRPQ9GZT3 109 aaKnown RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 ZNF71Q9NQZ8 489 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-203ENST00000428128 MRPL16Q9NX20 251 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms