RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 GHRLQ9UBU3 117 aa8.39□□□□□ -1.07
DDX39B-208ENST00000428098 IGHV3-21A0A0B4J1V1 117 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 IGLC7A0M8Q6 106 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 BET1O15155 118 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 DFFBO76075 338 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 SRMP19623 302 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 ETV1P50549 477 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 TMEM50BP56557 158 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 BRWD1-AS2P59051 145 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 QRFPP83859 136 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 OR2B11Q5JQS5 317 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 SERTAD4-AS1Q5TG53 156 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 ZNF66Q6ZN08 573 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 TCF24Q7RTU0 167 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 GGHQ92820 318 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 SMIM19Q96E16 107 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 BSCL2Q96G97 398 aaPredicted RBP8.38□□□□□ -1.07
DDX39B-208ENST00000428098 UQCC2Q9BRT2 126 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
DDX39B-208ENST00000428098 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
DDX39B-208ENST00000428098 TRBV6-7A0A0A0MS04 114 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 FOXI3A8MTJ6 420 aaPredicted RBP8.37□□□□□ -1.07
DDX39B-208ENST00000428098 APOHP02749 345 aaPredicted RBP8.37□□□□□ -1.07
DDX39B-208ENST00000428098 CTSGP08311 255 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 SPP1P10451 314 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 HTN3P15516 51 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 MAS1LP35410 378 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 EMP1P54849 157 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 ARFRP1Q13795 201 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 FLOT2Q14254 428 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 SPSB3Q6PJ21 355 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 ZFP41Q8N8Y5 198 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 SLC29A1Q99808 456 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 TMEM59Q9BXS4 323 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 BABAM2Q9NXR7 383 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 SMPD3Q9NY59 655 aaPredicted RBP8.37□□□□□ -1.07
DDX39B-208ENST00000428098 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
DDX39B-208ENST00000428098 NUPL2O15504 423 aaKnown RBP8.36□□□□□ -1.07
DDX39B-208ENST00000428098 FABP7O15540 132 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 DCTN3O75935 186 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 SERPINB10P48595 397 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 OR2B8PP59922 312 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 PLA2G7Q13093 441 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 FAM89BQ8N5H3 189 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 OR4A4PQ8NGN8 299 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 CMTM3Q96MX0 182 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 KRTAP1-5Q9BYS1 174 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 LPAR5Q9H1C0 372 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 C12orf4Q9NQ89 552 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 MRPS18AQ9NVS2 196 aaKnown RBP8.36□□□□□ -1.07
DDX39B-208ENST00000428098 ARL2BPQ9Y2Y0 163 aa8.36□□□□□ -1.07
DDX39B-208ENST00000428098 SNTNA6NMZ2 147 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 TMEM14DPA8MWL7 114 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 J3QRK9 145 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 DNASE2O00115 360 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-208ENST00000428098 HLA-GP17693 338 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 CELP19835 753 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 BTF3P20290 206 aaKnown RBP8.35□□□□□ -1.07
DDX39B-208ENST00000428098 CRHBPP24387 322 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 DLK1P80370 383 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 YIF1BQ5BJH7 314 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 UBE2UQ5VVX9 321 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 MFSD4AQ8N468 514 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 OR10W1Q8NGF6 305 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 ST8SIA2Q92186 375 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 DGCR14Q96DF8 476 aaKnown RBP8.35□□□□□ -1.07
DDX39B-208ENST00000428098 ARHGAP5-AS1Q96IT6 56 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 DERL3Q96Q80 235 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 CABLES2Q9BTV7 478 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 POMPQ9Y244 141 aa8.35□□□□□ -1.07
DDX39B-208ENST00000428098 RBM7Q9Y580 266 aaKnown RBP8.35□□□□□ -1.07
DDX39B-208ENST00000428098 TRAV14DV4A0A0A6YYC5 116 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-208ENST00000428098 YIF1AO95070 293 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 UBBP0CG47 229 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 RPL8P62917 257 aaKnown RBP8.34□□□□□ -1.07
DDX39B-208ENST00000428098 ZIK1Q3SY52 487 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-208ENST00000428098 C1orf100Q5SVJ3 147 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 SLC25A24Q6NUK1 477 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 VSTM2AQ8TAG5 236 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 CMSS1Q9BQ75 279 aaKnown RBP8.34□□□□□ -1.07
DDX39B-208ENST00000428098 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 THYN1Q9P016 225 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
DDX39B-208ENST00000428098 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms