RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SHOXO15266 292 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 IFNA5P01569 189 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 RPP30P78346 268 aaKnown RBP12.64□□□□□ -0.39
SHOX2-202ENST00000425436 DHRS7BQ6IAN0 325 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-202ENST00000425436 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 LYG1Q8N1E2 194 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 DDB2Q92466 427 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 BSCL2Q96G97 398 aaPredicted RBP12.64□□□□□ -0.39
SHOX2-202ENST00000425436 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
SHOX2-202ENST00000425436 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
SHOX2-202ENST00000425436 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
SHOX2-202ENST00000425436 NF1P21359 2839 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
SHOX2-202ENST00000425436 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 IGHV3-7P01780 117 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 DYNLT3P51808 116 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 F2RL1P55085 397 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 COMMD1Q8N668 190 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 TEX29Q8N6K0 151 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 CLCC1Q96S66 551 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 MS4A7Q9GZW8 240 aaPredicted RBP12.63□□□□□ -0.39
SHOX2-202ENST00000425436 RBKSQ9H477 322 aa12.63□□□□□ -0.39
SHOX2-202ENST00000425436 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 SLC31A2O15432 143 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 CST7O76096 145 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 NXPH3O95157 252 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 HRASP01112 189 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 RBP4P02753 201 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-202ENST00000425436 CLINT1Q14677 625 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 ZNF596Q8TC21 504 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 LEAP2Q969E1 77 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-202ENST00000425436 TMEM133Q9H2Q1 129 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 UBE2E1P51965 193 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 SPCS3P61009 180 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 RTL8BQ17RB0 113 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 PDLIM3Q53GG5 364 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-202ENST00000425436 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 SCGB1C1Q8TD33 95 aa12.62□□□□□ -0.39
SHOX2-202ENST00000425436 A0A087X0M5 115 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 A0A1B0GX30 115 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 IAPPP10997 89 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 TMEM14EPQ6UXP3 125 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 DPPA3Q6W0C5 159 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 ZNF429Q86V71 674 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 ABHD12Q8N2K0 398 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 HSD17B11Q8NBQ5 300 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 OR13D1Q8NGV5 346 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 LYPD6BQ8NI32 183 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 DTD1Q8TEA8 209 aa12.61□□□□□ -0.39
SHOX2-202ENST00000425436 IGHV2-26A0A0B4J1V2 119 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 CEBPZOSA8MTT3 80 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 NPFFO15130 113 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 ARG1P05089 322 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 IL3RAP26951 378 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 GNG10P50151 68 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 SLC25A24Q6NUK1 477 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 BTNL8Q6UX41 500 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 ZNF833PQ6ZTB9 187 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
SHOX2-202ENST00000425436 ZNRD1Q9P1U0 126 aa12.6□□□□□ -0.39
SHOX2-202ENST00000425436 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 PRH1P02810 166 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 PAX6P26367 422 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 ATP6V0CP27449 155 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 SAA4P35542 130 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 CAMLGP49069 296 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
SHOX2-202ENST00000425436 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 ZNF383Q8NA42 475 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 OR9G1Q8NH87 305 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 CLEC7AQ9BXN2 247 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 HIPK2Q9H2X6 1198 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
SHOX2-202ENST00000425436 A0A1W2PPE3 182 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 H3BP45 60 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 J3QR06 171 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 IFNA17P01571 189 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 APOA2P02652 100 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 CT45A6P0DMU7 189 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 CT45A5P0DMU8 189 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms