RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 RNASE6Q93091 150 aaKnown RBP1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 MS4A6EQ96DS6 147 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SLC35G5Q96KT7 338 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 TIMM21Q9BVV7 248 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SLC2A9Q9NRM0 540 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 GMEB1Q9Y692 573 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 FMN2Q9NZ56 1722 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 COL1A1P02452 1464 aaPredicted RBP1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 ANKARQ7Z5J8 1434 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 PCNX1Q96RV3 2341 aa1.48□□□□□ -2.17
RAB3GAP1-202ENST00000425393 EYSQ5T1H1 3165 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SPTAN1Q13813 2472 aaKnown RBP1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 GCN1Q92616 2671 aaKnown RBP1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 PAPPA2Q9BXP8 1791 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 CREBBPQ92793 2442 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SPTBN5Q9NRC6 3674 aaKnown RBP1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 KNDC1Q76NI1 1749 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 NALCNQ8IZF0 1738 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 GOLGA6L10A6NI86 522 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 C2orf74A8MZ97 194 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 M0R381 172 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 HIST1H1CP16403 213 aaKnown RBP1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 PEBP1P30086 187 aaKnown RBP1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 FABP5Q01469 135 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SDHAF4Q5VUM1 108 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SPATA12Q7Z6I5 190 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 CD302Q8IX05 232 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 OR4X2Q8NGF9 303 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 SLC37A2Q8TED4 501 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 FGF13Q92913 245 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 EURLQ9NYK6 297 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 EMC3Q9P0I2 261 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 MBD5Q9P267 1494 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 NHSQ6T4R5 1651 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 CTTNBP2Q8WZ74 1663 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 ALS2Q96Q42 1657 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 A0A1W2PP64 1363 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 ANKRD36BQ8N2N9 1353 aa1.47□□□□□ -2.17
RAB3GAP1-202ENST00000425393 ABCC6O95255 1503 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 RANBP2P49792 3224 aaKnown RBP1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MYO18BQ8IUG5 2567 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 TEX50A0A1B0GTY4 177 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 A0A1W2PQD3 144 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 FABP12A6NFH5 140 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MT-CO2P00403 227 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CXCL2P19875 107 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 EBPQ15125 230 aaKnown RBP1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 DNAL1Q4LDG9 190 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 PABPC1L2AQ5JQF8 200 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MIEN1Q9BRT3 115 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MS4A6AQ9H2W1 248 aa1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 TEP1Q99973 2627 aaKnown RBP1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 DICER1Q9UPY3 1922 aaKnown RBP1.46□□□□□ -2.18
RAB3GAP1-202ENST00000425393 NCOR2Q9Y618 2525 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 SLX4Q8IY92 1834 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ZNF532Q9HCE3 1301 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MAP1BP46821 2468 aaKnown RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MRC1P22897 1456 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 TRGV5A0A0B4J1U4 118 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 TINCRA0A1B0GVN0 87 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ZNF705FA8MVS1 300 aaPredicted RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CALUO43852 315 aaPredicted RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 STX10O60499 249 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ATP6V1G2O95670 118 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CXCL3P19876 107 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 RPL14P50914 215 aaKnown RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 TAS2R30P59541 319 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 RPS24P62847 133 aaKnown RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 LHFPL1Q86WI0 220 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 LRRC34Q8IZ02 419 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 LHFPL5Q8TAF8 219 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 RPS4Y2Q8TD47 263 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CYGBQ8WWM9 190 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ASB13Q8WXK3 278 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CFAP53Q96M91 514 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 PACRGQ96M98 296 aaPredicted RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 NSRP1Q9H0G5 558 aaKnown RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 HDGFL3Q9Y3E1 203 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 PCYT1BQ9Y5K3 369 aaPredicted RBP1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 PIK3C2GO75747 1445 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MYO9AB2RTY4 2548 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CEP152O94986 1710 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 DSCAMO60469 2012 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 COL4A1P02462 1669 aa1.45□□□□□ -2.18
RAB3GAP1-202ENST00000425393 AKAP12Q02952 1782 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ADGRB1O14514 1584 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 GVINP1Q7Z2Y8 2422 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 MKI67P46013 3256 aaKnown RBP1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 CFAP47Q6ZTR5 3102 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 OR6C6A6NF89 314 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 SIGLEC16A6NMB1 481 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 HINT1P49773 126 aaPredicted RBP1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 IDH3GP51553 393 aaPredicted RBP1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 HOXC5Q00444 222 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 GNA13Q14344 377 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ZNF791Q3KP31 576 aaPredicted RBP1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 DAND5Q8N907 189 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 NDEL1Q9GZM8 345 aa1.44□□□□□ -2.18
RAB3GAP1-202ENST00000425393 IMP3Q9NV31 184 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms