RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 Q96M66 194 aa6.5□□□□□ -1.37
TRIM43CP-201ENST00000422468 PARP12Q9H0J9 701 aaKnown RBP6.5□□□□□ -1.37
TRIM43CP-201ENST00000422468 C5orf66Q9H5L9 145 aa6.5□□□□□ -1.37
TRIM43CP-201ENST00000422468 MLXQ9UH92 298 aa6.5□□□□□ -1.37
TRIM43CP-201ENST00000422468 HSF4Q9ULV5 492 aa6.5□□□□□ -1.37
TRIM43CP-201ENST00000422468 C13orf42A0A1B0GVH6 325 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 SDCBPO00560 298 aaPredicted RBP6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 HSD17B6O14756 317 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 SLC31A2O15432 143 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 DIRAS3O95661 229 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 MPIG6BO95866 241 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 PMP2P02689 132 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 TMEM11P17152 192 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 CAV2P51636 162 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 LOXL3P58215 753 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 ZNF816Q0VGE8 651 aaPredicted RBP6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 SRSF7Q16629 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 LRRC37A5PQ49AS3 106 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 C10orf99Q6UWK7 81 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 GVQW1Q8N7I0 195 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 C5orf56Q8N8D9 126 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 C8orf31Q8N9H6 132 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 TMEM230Q96A57 120 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 SULT4A1Q9BR01 284 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 HDHD3Q9BSH5 251 aaPredicted RBP6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 SLC5A7Q9GZV3 580 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 PLEKHA2Q9HB19 425 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 PARP11Q9NR21 331 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 UQCC1Q9NVA1 299 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 NECAP2Q9NVZ3 263 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 TRAPPC2LQ9UL33 140 aa6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
TRIM43CP-201ENST00000422468 A0A1W2PPE3 182 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 H0YIZ8 118 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 NUPL2O15504 423 aaKnown RBP6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 SOCS1O15524 211 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 SPINT2O43291 252 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 JTBO76095 146 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 IGKV1D-33P01593 117 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 IGKV1-33P01594 117 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 CD5P06127 495 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 CTSDP07339 412 aaPredicted RBP6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 IGLL1P15814 213 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 ADCYAP1P18509 176 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 FUT3P21217 361 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 CHATP28329 748 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 ZNF134P52741 427 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 F2RL1P55085 397 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 TMEM50BP56557 158 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 ARFRP1Q13795 201 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 EBI3Q14213 229 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 HNF4GQ14541 408 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 GNMTQ14749 295 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 SMCO1Q147U7 214 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 TMEM30BQ3MIR4 351 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 RNF212Q495C1 297 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 TRAT1Q6PIZ9 186 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 LINC00311Q8N616 119 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 C15orf54Q8N8G6 183 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 ZNF439Q8NDP4 499 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 OR4A4PQ8NGN8 299 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 LYPD6BQ8NI32 183 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 RTBDNQ9BSG5 229 aaPredicted RBP6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 ARV1Q9H2C2 271 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 TUBA4BQ9H853 241 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 GFOD1Q9NXC2 390 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 KCNIP1Q9NZI2 227 aa6.48□□□□□ -1.37
TRIM43CP-201ENST00000422468 IGHV1-3A0A0C4DH29 117 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 ZNF98A6NK75 572 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 ZNF705EA8MWA4 302 aaPredicted RBP6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 C12orf77C9JDV5 145 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 GPR31O00270 319 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 PDCD6O75340 191 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 IFNA21P01568 189 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 IGHG2P01859 326 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 RCC1P18754 421 aaPredicted RBP6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 DTYMKP23919 212 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 IL3RAP26951 378 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 REG1BP48304 166 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 RAB5CP51148 216 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 SUPT4H1P63272 117 aaKnown RBP6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 ANKRD55Q3KP44 614 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 Q3ZCU0 254 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 KHDC1LQ5JSQ8 128 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 AADACL3Q5VUY0 350 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 TMEM268Q5VZI3 342 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 BTNL8Q6UX41 500 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 MOB1BQ7L9L4 216 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 MOB3BQ86TA1 216 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 TGIF2LXQ8IUE1 241 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 Q8N6K4 173 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 UBAC2Q8NBM4 344 aa6.47□□□□□ -1.37
TRIM43CP-201ENST00000422468 OR2T10Q8NGZ9 312 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms