RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 PROCRQ9UNN8 238 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 TRAPPC1Q9Y5R8 145 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 BSNQ9UPA5 3926 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 AKAP13Q12802 2813 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 RPP30P78346 268 aaKnown RBP13.01□□□□□ -0.33
CDH1-202ENST00000422392 MRPL41Q8IXM3 137 aaKnown RBP13.01□□□□□ -0.33
CDH1-202ENST00000422392 TMEM256Q8N2U0 113 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 OCC1Q8TAD7 63 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 SARAFQ96BY9 339 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 SAA2-SAA4A0A096LPE2 208 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 F6UZH7 168 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 NUPR1O60356 82 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 IL6RP08887 468 aaPredicted RBP13.01□□□□□ -0.33
CDH1-202ENST00000422392 SAA2P0DJI9 122 aaPredicted RBP13.01□□□□□ -0.33
CDH1-202ENST00000422392 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
CDH1-202ENST00000422392 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
CDH1-202ENST00000422392 MPDU1O75352 247 aa13□□□□□ -0.33
CDH1-202ENST00000422392 SNRPCP09234 159 aaKnown RBP13□□□□□ -0.33
CDH1-202ENST00000422392 OR4A8P0C604 315 aa13□□□□□ -0.33
CDH1-202ENST00000422392 RNF224P0DH78 156 aa13□□□□□ -0.33
CDH1-202ENST00000422392 PAX5Q02548 391 aa13□□□□□ -0.33
CDH1-202ENST00000422392 SEM1Q6ZVN7 128 aa13□□□□□ -0.33
CDH1-202ENST00000422392 DDB2Q92466 427 aa13□□□□□ -0.33
CDH1-202ENST00000422392 LOXL4Q96JB6 756 aa13□□□□□ -0.33
CDH1-202ENST00000422392 ZNRD1Q9P1U0 126 aa13□□□□□ -0.33
CDH1-202ENST00000422392 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
CDH1-202ENST00000422392 MDFIC2A0A1B0GVS7 189 aa13□□□□□ -0.33
CDH1-202ENST00000422392 F2RL2O00254 374 aa13□□□□□ -0.33
CDH1-202ENST00000422392 CXorf1O96002 111 aa13□□□□□ -0.33
CDH1-202ENST00000422392 CGAP01215 116 aa13□□□□□ -0.33
CDH1-202ENST00000422392 GNG10P50151 68 aa13□□□□□ -0.33
CDH1-202ENST00000422392 C17orf58Q2M2W7 97 aa13□□□□□ -0.33
CDH1-202ENST00000422392 OR4A47Q6IF82 309 aa13□□□□□ -0.33
CDH1-202ENST00000422392 STPG3Q8N7X2 389 aa13□□□□□ -0.33
CDH1-202ENST00000422392 DEFB108BQ8NET1 73 aa13□□□□□ -0.33
CDH1-202ENST00000422392 ELOVL5Q9NYP7 299 aa13□□□□□ -0.33
CDH1-202ENST00000422392 TACC2O95359 2948 aa13□□□□□ -0.33
CDH1-202ENST00000422392 SLC17A3O00476 420 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 ACTL6BO94805 426 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 LCN2P80188 198 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 EFNB3Q15768 340 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 HLA-DRB5Q30154 266 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 NPVFQ9HCQ7 196 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
CDH1-202ENST00000422392 DYSFO75923 2080 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 SPAARA0A1B0GVQ0 90 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 GRIFINA4D1Z8 144 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 A8MWP6 167 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 CA2P00918 260 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 IGFBP2P18065 325 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 RPL31P62899 125 aaKnown RBP12.99□□□□□ -0.33
CDH1-202ENST00000422392 SSX2Q16385 188 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 IMMP2LQ96T52 175 aa12.99□□□□□ -0.33
CDH1-202ENST00000422392 TRAV17A0A0B4J275 112 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 K7EN84 100 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 NPY1RP25929 384 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 GCHFRP30047 84 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 TMPRSS3P57727 454 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 DEFB109BQ30KR1 87 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 PPP1R35Q8TAP8 253 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 SNRNP40Q96DI7 357 aaKnown RBP12.98□□□□□ -0.33
CDH1-202ENST00000422392 ADMP35318 185 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 TIMP3P35625 211 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 OR4P4Q8NGL7 312 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
CDH1-202ENST00000422392 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 CD99P14209 185 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 CD33P20138 364 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 FOXL1Q12952 345 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 MISP3Q96FF7 219 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 NAV3Q8IVL0 2385 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 MMP23AO75900 390 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 GCGP01275 180 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 PAX1P15863 534 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 NDUFB7P17568 137 aa12.97□□□□□ -0.33
CDH1-202ENST00000422392 GATA2P23769 480 aaPredicted RBP12.97□□□□□ -0.33
CDH1-202ENST00000422392 KLF3P57682 345 aaPredicted RBP12.97□□□□□ -0.33
CDH1-202ENST00000422392 MZT1Q08AG7 82 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms