RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RNF2Q99496 336 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 NAT8BQ9UHF3 227 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 TRAV3A0A0B4J244 114 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 PMCHP20382 165 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 AMTP48728 403 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 HTD2P86397 168 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 EFNB3Q15768 340 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 SLC35E1Q96K37 410 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 SFXN3Q9BWM7 321 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 HES4Q9HCC6 221 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 PROP1O75360 226 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 VDAC2P45880 294 aaPredicted RBP17.61■□□□□ 0.41
USP48-205ENST00000421625 TBC1D28Q2M2D7 210 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 FOXJ2Q9P0K8 574 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 OR4A16Q8NH70 328 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 SLC25A40Q8TBP6 338 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 GNB1LQ9BYB4 327 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 TTTY12Q9BZ98 90 aa17.61■□□□□ 0.41
USP48-205ENST00000421625 AHCTF1Q8WYP5 2266 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 C9JCJ5 164 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 GFRA3O60609 400 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 SUMO1P63165 101 aaKnown RBP17.6■□□□□ 0.41
USP48-205ENST00000421625 C11orf52Q96A22 123 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 TRGV10A0A0A0MS01 117 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 NDUFB8O95169 186 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 CGAP01215 116 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 TMEM105Q8N8V8 129 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 WDR31Q8NA23 367 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 CT55Q8WUE5 264 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 B4GALT7Q9UBV7 327 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 SLC45A2Q9UMX9 530 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 KNTC1P50748 2209 aa17.6■□□□□ 0.41
USP48-205ENST00000421625 A0A1W2PS18 150 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 TCL1AP56279 114 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 FXYD3Q14802 87 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 DCAF12Q5T6F0 453 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 DOLPP1Q86YN1 238 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 STPG3Q8N7X2 389 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 OR4P4Q8NGL7 312 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 STARD4Q96DR4 205 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 UHRF2Q96PU4 802 aa17.59■□□□□ 0.41
USP48-205ENST00000421625 RNASE7Q9H1E1 156 aaKnown RBP17.59■□□□□ 0.41
USP48-205ENST00000421625 DUTP33316 252 aaKnown RBP17.59■□□□□ 0.41
USP48-205ENST00000421625 TIPARPQ7Z3E1 657 aaKnown RBP17.59■□□□□ 0.41
USP48-205ENST00000421625 LSM4Q9Y4Z0 139 aaKnown RBP17.59■□□□□ 0.41
USP48-205ENST00000421625 ZNF83P51522 516 aa17.58■□□□□ 0.41
USP48-205ENST00000421625 AARDQ4LEZ3 155 aa17.58■□□□□ 0.41
USP48-205ENST00000421625 CENPWQ5EE01 88 aa17.58■□□□□ 0.41
USP48-205ENST00000421625 KCNS1Q96KK3 526 aa17.58■□□□□ 0.41
USP48-205ENST00000421625 OBP2BQ9NPH6 170 aa17.58■□□□□ 0.41
USP48-205ENST00000421625 HYPMO75409 117 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 IGHV3-13P01766 116 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 IGHV3-7P01780 117 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 TMPRSS3P57727 454 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 FBXW9Q5XUX1 488 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 TMEM136Q6ZRR5 245 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 C11orf53Q8IXP5 236 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 TMEM251Q8N6I4 163 aa17.58■□□□□ 0.4
USP48-205ENST00000421625 NANOS1Q8WY41 292 aaKnown RBP17.58■□□□□ 0.4
USP48-205ENST00000421625 TRBV9A0A0B4J1U6 114 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 MPV17P39210 176 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 WNT10AQ9GZT5 417 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 TRAV34A0A0B4J273 112 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 ACTL6BO94805 426 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 IGLC2P0DOY2 106 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 IGLC3P0DOY3 106 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 GPR12P47775 334 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 RHOBP62745 196 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 Q6ZN92 141 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 PQLC2Q6ZP29 291 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 TXN2Q99757 166 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 LY96Q9Y6Y9 160 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 ZNF253O75346 499 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 UQCR10Q9UDW1 63 aa17.57■□□□□ 0.4
USP48-205ENST00000421625 CRYBB3P26998 211 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 GNG4P50150 75 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 CX3CL1P78423 397 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 SSPNQ14714 243 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 ACP7Q6ZNF0 438 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 FAM19A2Q8N3H0 131 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 NPVFQ9HCQ7 196 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 YLPM1P49750 1951 aaKnown RBP17.56■□□□□ 0.4
USP48-205ENST00000421625 OR5G3P0C626 314 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 C3orf79P0CE67 100 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 SRIP30626 198 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 RELBQ01201 579 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 MIR17HGQ75NE6 70 aa17.56■□□□□ 0.4
USP48-205ENST00000421625 CACNA1HO95180 2353 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 AHRRA9YTQ3 701 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 SP1P08047 785 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 PLGLB1Q02325 96 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 EDDM3AQ14507 147 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 RPL39P5Q59GN2 51 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 MRPL54Q6P161 138 aaKnown RBP17.55■□□□□ 0.4
USP48-205ENST00000421625 ATOH7Q8N100 152 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 URB1O60287 2271 aaKnown RBP17.55■□□□□ 0.4
USP48-205ENST00000421625 LNP1A1A4G5 178 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 IQCF6A8MYZ5 107 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 M0R1X1 148 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 HNRNPA3P51991 378 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms