RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
SHROOM2-202ENST00000418909 SLC16A13Q7RTY0 426 aa9.42□□□□□ -0.9
SHROOM2-202ENST00000418909 MYPOPQ86VE0 399 aaPredicted RBP9.42□□□□□ -0.9
SHROOM2-202ENST00000418909 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
SHROOM2-202ENST00000418909 TRBV6-7A0A0A0MS04 114 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 A0A1W2PNU3 283 aaPredicted RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 CXorf1O96002 111 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 REG1AP05451 166 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 MSMBP08118 114 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 MORN2Q502X0 79 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 DDB2Q92466 427 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 ZNF705GA8MUZ8 300 aaPredicted RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 SCO1O75880 301 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 LY6HO94772 140 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 COL8A2P25067 703 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 IZUMO4Q1ZYL8 232 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 NHLRC3Q5JS37 347 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 CHD8Q9HCK8 2581 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 C7orf66A4D0T2 115 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 ZNF439Q8NDP4 499 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 NKX6-2Q9C056 277 aaPredicted RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 PNRC2Q9NPJ4 139 aaKnown RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 TIMM23O14925 209 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 FCGR2BP31994 310 aaPredicted RBP9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 MAS1LP35410 378 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 ZNF137PP52743 207 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 RND3P61587 244 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 SAPCD1Q5SSQ6 148 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 Q96MF0 132 aa9.41□□□□□ -0.9
SHROOM2-202ENST00000418909 TSTD3H0UI37 97 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 HKR1P10072 659 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 EFNB1P98172 346 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 EFNB3Q15768 340 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 CLEC9AQ6UXN8 241 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 FAM89BQ8N5H3 189 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 PITX3O75364 302 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 ZNF735P0CB33 412 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 PQLC2Q6ZP29 291 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 PEMTQ9UBM1 199 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 MALRD1Q5VYJ5 2156 aa9.4□□□□□ -0.9
SHROOM2-202ENST00000418909 J3QRE1 110 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 C1QL1O75973 258 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 ORM1P02763 201 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 VMO1Q7Z5L0 202 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 EAF1Q96JC9 268 aaPredicted RBP9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 DUX5Q96PT3 197 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 MOB4Q9Y3A3 225 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 SHISA3A0PJX4 238 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 OR2C1O95371 312 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 SELLP14151 372 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 UCP1P25874 307 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 DLX6P56179 175 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 BATFQ16520 125 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 TMEM42Q69YG0 159 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 DMRTC2Q8IXT2 367 aaPredicted RBP9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 NPIPB3Q92617 1050 aa9.4□□□□□ -0.91
SHROOM2-202ENST00000418909 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 FGF8P55075 233 aaPredicted RBP9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 HEATR5AQ86XA9 2040 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 SEC11BP0C7V7 166 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 MYOD1P15172 320 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 CXCL3P19876 107 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 TSPOP30536 169 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 NDUFA6P56556 154 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 PLSCR3Q9NRY6 295 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 BEX4Q9NWD9 120 aaPredicted RBP9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 IGHV3-35A0A0C4DH35 117 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 IGSF23A1L1A6 192 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 COL8A1P27658 744 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 TMEM200BQ69YZ2 307 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 SRSF12Q8WXF0 261 aaKnown RBP9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 GALNT14Q96FL9 552 aa9.39□□□□□ -0.91
SHROOM2-202ENST00000418909 A0A1W2PRX2 142 aa9.38□□□□□ -0.91
SHROOM2-202ENST00000418909 NPFFO15130 113 aa9.38□□□□□ -0.91
SHROOM2-202ENST00000418909 MLNRO43193 412 aa9.38□□□□□ -0.91
SHROOM2-202ENST00000418909 TGOLN2O43493 480 aa9.38□□□□□ -0.91
SHROOM2-202ENST00000418909 ATP6V0CP27449 155 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms