RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NPY1RP25929 384 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 MC5RP33032 325 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 HOXA1P49639 335 aaPredicted RBP7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 RAB2AP61019 212 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 RAB11AP62491 216 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 CCL20P78556 96 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 TMEM249Q2WGJ8 235 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 C2orf83Q53S99 150 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 KHDC3LQ587J8 217 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 AVPI1Q5T686 147 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 ACSM6Q6P461 480 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 ETV3LQ6ZN32 361 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 TGIF2LXQ8IUE1 241 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 SLC24A4Q8NFF2 622 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 CLDND2Q8NHS1 167 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 VSTM2AQ8TAG5 236 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 LHX4Q969G2 390 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 HARBI1Q96MB7 349 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 CLEC7AQ9BXN2 247 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 SLC35B3Q9H1N7 401 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 LSM4Q9Y4Z0 139 aaKnown RBP7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 PLXNB1O43157 2135 aa7.34□□□□□ -1.23
LINCMD1-201ENST00000418518 IGSF10Q6WRI0 2623 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 USP24Q9UPU5 2620 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 SMG1Q96Q15 3661 aaKnown RBP7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PPIAL4CA0A0B4J2A2 164 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 CTXND1A0A1B0GTU2 59 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 TEX50A0A1B0GTY4 177 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 hCG_1809904A0A1W2PP81 198 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1W2PPE2 198 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1W2PR64 198 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1W2PRV1 198 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 SEC14L6B5MCN3 397 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 C22orf46C9J442 243 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 C17orf112F2Z3M2 114 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 LY6LH3BQJ8 138 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 RRHO14718 337 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 IFNA10P01566 189 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 LIPFP07098 398 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PPIAL4GP0DN37 164 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 CD1BP29016 333 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PLA2G5P39877 138 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 LGALS7P47929 136 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PPT1P50897 306 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PRRX1P54821 245 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 BTN1A1Q13410 526 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 DIAPH2-AS1Q14236 149 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 ICAM4Q14773 271 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 SSX7Q7RTT5 188 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 RPP25LQ8N5L8 163 aaKnown RBP7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 KIR3DL3Q8N743 410 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 OR4P4Q8NGL7 312 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 OR1L8Q8NGR8 309 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 SFT2D1Q8WV19 159 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 IGFBPL1Q8WX77 278 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 FLYWCH2Q96CP2 140 aaKnown RBP7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 UNKLQ9H9P5 680 aaKnown RBP7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 NDUFA4L2Q9NRX3 87 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 KCNIP2Q9NS61 270 aa7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 AMMECR1Q9Y4X0 333 aaPredicted RBP7.33□□□□□ -1.24
LINCMD1-201ENST00000418518 CFAP46Q8IYW2 2715 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 MAP1LC3B2A6NCE7 125 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 FAM74A7A6NL05 159 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 BUB1B-PAK6H3BSN5 160 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 C19orf84I3L1E1 186 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 CA2P00918 260 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 CRYGBP07316 175 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 SRP19P09132 144 aaKnown RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 RNASE2P10153 161 aaKnown RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 PAX6P26367 422 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 TAGLN2P37802 199 aaKnown RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 OPRK1P41145 380 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 NPBWR1P48145 328 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 RPL8P62917 257 aaKnown RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 MRGPRG-AS1Q2M3A8 158 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 FAM74A3Q4VXF1 159 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 C1orf122Q6ZSJ8 110 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 ZNF709Q8N972 641 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 TEX45Q8NA69 505 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 CLRN3Q8NCR9 226 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 OR11H6Q8NGC7 330 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 C1orf159Q96HA4 380 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 RNF5Q99942 180 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 MAP1LC3BQ9GZQ8 125 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 ENY2Q9NPA8 101 aa7.32□□□□□ -1.24
LINCMD1-201ENST00000418518 WNK2Q9Y3S1 2297 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1W2PN81 502 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 ODF3BA8MYP8 253 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 OVOL3O00110 214 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 LY6HO94772 140 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 F12P00748 615 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 BCL2P10415 239 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms