RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RPL39P5Q59GN2 51 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 COLCA1Q6ZS62 124 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 PPP1R27Q86WC6 154 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 ARPC1AQ92747 370 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 HKR1P10072 659 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 MUC1P15941 1255 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 CDKN1AP38936 164 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FBXL15Q9H469 300 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 M0QZK8 103 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 C1QCP02747 245 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF345Q14585 488 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 NRN1LQ496H8 165 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM54Q969K7 222 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 OR5P3Q8WZ94 311 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 GPR146Q96CH1 333 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 BEX4Q9NWD9 120 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 H7C1H1 209 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 CRYBB3P26998 211 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 AMELYQ99218 206 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 HSPB9Q9BQS6 159 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 CECR9P0C854 216 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ACP7Q6ZNF0 438 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM252Q8N6L7 170 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 NPFFR1Q9GZQ6 430 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF703Q9H7S9 590 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 LRRC37AA6NMS7 1700 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TCRBV4S1A1TA0A5B7 111 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TM4SF5O14894 197 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TDGF1P13385 188 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ERASQ7Z444 233 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 SPSB2Q99619 263 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 METRNQ9UJH8 293 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 MDKP21741 143 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 RNASE6Q93091 150 aaKnown RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
PTCH1-205ENST00000418258 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 ICAM4Q14773 271 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 SPATA45Q537H7 98 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 C1QTNF12Q5T7M4 302 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 C9orf62Q8N4C0 152 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TCF19Q9Y242 345 aa9.54□□□□□ -0.88
PTCH1-205ENST00000418258 TRBV5-3A0A0A0MS03 114 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 ZIC4Q8N9L1 334 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 SIRT4Q9Y6E7 314 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-205ENST00000418258 IGLV1-36A0A0B4J1U3 117 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 LDLRAD2Q5SZI1 272 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 SPSB4Q96A44 273 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 RPS11P62280 158 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTCH1-205ENST00000418258 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 FOXC2Q99958 501 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 VGLL1Q99990 258 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM70Q9BUB7 260 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A26D6RGX4 464 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 PRSS23O95084 383 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 OTX1P32242 354 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM170BQ5T4T1 132 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 WDR82Q6UXN9 313 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 TUBD1Q9UJT1 453 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 ABLIM2Q6H8Q1 611 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 MRPL32Q9BYC8 188 aaKnown RBP9.53□□□□□ -0.88
PTCH1-205ENST00000418258 SEMA5BQ9P283 1151 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 EFEMP2O95967 443 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF818PQ6ZRF7 136 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 C19orf24Q9BVV8 132 aa9.53□□□□□ -0.88
PTCH1-205ENST00000418258 NPIPB8E9PQR5 432 aa9.52□□□□□ -0.88
PTCH1-205ENST00000418258 FAM201AQ5SY85 155 aa9.52□□□□□ -0.88
PTCH1-205ENST00000418258 AQP3Q92482 292 aa9.52□□□□□ -0.88
PTCH1-205ENST00000418258 TICRRQ7Z2Z1 1910 aa9.52□□□□□ -0.88
PTCH1-205ENST00000418258 HLA-DQA1P01909 254 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 MT-ND6P03923 174 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 FABP2P12104 132 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-205ENST00000418258 SMDT1Q9H4I9 107 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 MRPS18AQ9NVS2 196 aaKnown RBP9.52□□□□□ -0.89
PTCH1-205ENST00000418258 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM160Q9NX00 188 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 IGHMP01871 453 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 COL5A1-AS1Q5SY13 56 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 CYP2G1PQ6ZSU1 146 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 IGHV3-11P01762 117 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 NABP2Q9BQ15 211 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 ASIPP42127 132 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 RTN4RL2Q86UN3 420 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms