RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 TUSC1Q2TAM9 212 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 LINC01356Q8N9X3 169 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 VSTM2AQ8TAG5 236 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 PRNDQ9UKY0 176 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 IGSF23A1L1A6 192 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 SCO1O75880 301 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 KBTBD11O94819 623 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 EWSR1Q01844 656 aaKnown RBP eCLIP16.71■□□□□ 0.27
CASC3-203ENST00000418132 SSX2Q16385 188 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 DYNAPQ8N1N2 210 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 OR4A5Q8NH83 315 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 TMEM167AQ8TBQ9 72 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 MALSU1Q96EH3 234 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 AJUBAQ96IF1 538 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 RNF5Q99942 180 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 SLC25A31Q9H0C2 315 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 HIF1ANQ9NWT6 349 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 VENTXO95231 258 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 IFNA17P01571 189 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 DTD1Q8TEA8 209 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 C17orf50Q8WW18 174 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 ZDHHC16Q969W1 377 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 PSENENQ9NZ42 101 aa16.71■□□□□ 0.27
CASC3-203ENST00000418132 TET2Q6N021 2002 aaPredicted RBP16.7■□□□□ 0.26
CASC3-203ENST00000418132 NPFFO15130 113 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 SAA4P35542 130 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 NHLH2Q02577 135 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 VMA21Q3ZAQ7 101 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 EIF5AL1Q6IS14 154 aaKnown RBP16.7■□□□□ 0.26
CASC3-203ENST00000418132 Q96MF0 132 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 CIB3Q96Q77 187 aaPredicted RBP16.7■□□□□ 0.26
CASC3-203ENST00000418132 ZNF257Q9Y2Q1 563 aa16.7■□□□□ 0.26
CASC3-203ENST00000418132 CEBPZOSA8MTT3 80 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 H3BP45 60 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 HSPE1P61604 102 aaKnown RBP16.69■□□□□ 0.26
CASC3-203ENST00000418132 MARC2Q969Z3 335 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 C7orf69Q9H7B7 122 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 WFDC1Q9HC57 220 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 NUP50Q9UKX7 468 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 TCF19Q9Y242 345 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 TNCP24821 2201 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 ZNF705EA8MWA4 302 aaPredicted RBP16.69■□□□□ 0.26
CASC3-203ENST00000418132 FBXO24O75426 580 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 PAX6P26367 422 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 BAXQ07812 192 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 STPG2Q8N412 459 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 UBAC2Q8NBM4 344 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 TSNAXQ99598 290 aaKnown RBP16.69■□□□□ 0.26
CASC3-203ENST00000418132 FKBP11Q9NYL4 201 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 PDZD2O15018 2839 aa16.69■□□□□ 0.26
CASC3-203ENST00000418132 ITPR2Q14571 2701 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 SLC25A17O43808 307 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 LY86O95711 162 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 CR1P17927 2039 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 TEX45Q8NA69 505 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 MAPK1IP1LQ8NDC0 245 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 OR51B2Q9Y5P1 312 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 IGHV1-69DA0A0B4J2H0 117 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 IGHV1-69P01742 117 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 CRYGBP07316 175 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 RPL8P62917 257 aaKnown RBP16.68■□□□□ 0.26
CASC3-203ENST00000418132 PLA2G2EQ9NZK7 142 aa16.68■□□□□ 0.26
CASC3-203ENST00000418132 HECTD1Q9ULT8 2610 aa16.67■□□□□ 0.26
CASC3-203ENST00000418132 CNTFRP26992 372 aa16.67■□□□□ 0.26
CASC3-203ENST00000418132 VDAC2P45880 294 aaPredicted RBP16.67■□□□□ 0.26
CASC3-203ENST00000418132 PSG5Q15238 335 aa16.67■□□□□ 0.26
CASC3-203ENST00000418132 OR5B3Q8NH48 314 aa16.67■□□□□ 0.26
CASC3-203ENST00000418132 ARV1Q9H2C2 271 aa16.67■□□□□ 0.26
CASC3-203ENST00000418132 CREBBPQ92793 2442 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 TRAV40A0A0B4J280 105 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 CST7O76096 145 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 IGKV1D-33P01593 117 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 IGKV1-33P01594 117 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 MYOD1P15172 320 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 SULT1A1P50225 295 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 MRGPRG-AS1Q2M3A8 158 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 TMEM249Q2WGJ8 235 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 SPANXN5Q5MJ07 72 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 TMEM14EPQ6UXP3 125 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 STX12Q86Y82 276 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 SAT2Q96F10 170 aaPredicted RBP16.66■□□□□ 0.26
CASC3-203ENST00000418132 ZNF430Q9H8G1 570 aaPredicted RBP16.66■□□□□ 0.26
CASC3-203ENST00000418132 BORCS7-ASMTA0A0B4J1R7 106 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 TEX50A0A1B0GTY4 177 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 RAB19A4D1S5 217 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 MOSP00540 346 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 IGHV4-31P0DP07 118 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 SULT1A2P50226 295 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 EBI3Q14213 229 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 BPIFCQ8NFQ6 507 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 TPSG1Q9NRR2 321 aa16.66■□□□□ 0.26
CASC3-203ENST00000418132 PRCDQ00LT1 54 aa16.65■□□□□ 0.26
CASC3-203ENST00000418132 TMEM267Q0VDI3 215 aaPredicted RBP16.65■□□□□ 0.26
CASC3-203ENST00000418132 EAF1Q96JC9 268 aaPredicted RBP16.65■□□□□ 0.26
CASC3-203ENST00000418132 SIGLEC9Q9Y336 463 aa16.65■□□□□ 0.26
CASC3-203ENST00000418132 PRRC2AP48634 2157 aaKnown RBP16.64■□□□□ 0.25
CASC3-203ENST00000418132 J3QLI3 93 aa16.64■□□□□ 0.25
CASC3-203ENST00000418132 TGFAP01135 160 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms