RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TRAV17A0A0B4J275 112 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 A0A1B0GV90 55 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 DVL1O14640 695 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 GNG10P50151 68 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
HDAC9-208ENST00000417496 TRAT1Q6PIZ9 186 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 RAB1CQ92928 201 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 AHRRA9YTQ3 701 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 ACTL6BO94805 426 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
HDAC9-208ENST00000417496 OR4A47Q6IF82 309 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 C22orf34Q6ZV56 151 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 LYG1Q8N1E2 194 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 CISD2Q8N5K1 135 aaKnown RBP11.92□□□□□ -0.5
HDAC9-208ENST00000417496 OR5R1Q8NH85 324 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 RNASEH2CQ8TDP1 164 aaKnown RBP11.92□□□□□ -0.5
HDAC9-208ENST00000417496 DDB2Q92466 427 aa11.92□□□□□ -0.5
HDAC9-208ENST00000417496 SLC17A3O00476 420 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 TMPRSS2O15393 492 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 MMP23AO75900 390 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 TYMSP04818 313 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 IL6RP08887 468 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 EFNB3Q15768 340 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 HLA-DRB5Q30154 266 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 F6UZH7 168 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 F2RL2O00254 374 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 CA2P00918 260 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 CD33P20138 364 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 PDLIM4P50479 330 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 RPL15P61313 204 aaKnown RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 NPVFQ9HCQ7 196 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
HDAC9-208ENST00000417496 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
HDAC9-208ENST00000417496 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 MPDU1O75352 247 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 CXorf1O96002 111 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 FRMD6-AS1P0C7T7 363 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 RNF224P0DH78 156 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 IGFBP2P18065 325 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 RPL31P62899 125 aaKnown RBP11.9□□□□□ -0.5
HDAC9-208ENST00000417496 PAX5Q02548 391 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 OR52E5Q8NH55 327 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 C15orf61A6NNL5 157 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 IGKV1-16P04430 117 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 OR4A8P0C604 315 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
HDAC9-208ENST00000417496 TMPRSS3P57727 454 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 MLANAQ16655 118 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 CR1LQ2VPA4 569 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 REC114Q7Z4M0 266 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 OR4P4Q8NGL7 312 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 PPP1R35Q8TAP8 253 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.5
HDAC9-208ENST00000417496 YLPM1P49750 1951 aaKnown RBP11.9□□□□□ -0.51
HDAC9-208ENST00000417496 K7EN84 100 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 LHBP01229 141 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 CGB3P0DN86 165 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 CGB7P0DN87 165 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 NPY1RP25929 384 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
HDAC9-208ENST00000417496 TEPPQ6URK8 271 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 IGFL2Q6UWQ7 119 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 OR4S2Q8NH73 311 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 ELOVL5Q9NYP7 299 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 A8MWP6 167 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 FTH1P19P0C7X4 201 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 GCHFRP30047 84 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 LCN2P80188 198 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 CCL13Q99616 98 aa11.89□□□□□ -0.51
HDAC9-208ENST00000417496 RIF1Q5UIP0 2472 aaKnown RBP11.88□□□□□ -0.51
HDAC9-208ENST00000417496 TIMP3P35625 211 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 MRPS11P82912 194 aaKnown RBP11.88□□□□□ -0.51
HDAC9-208ENST00000417496 MZT1Q08AG7 82 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 TMEM249Q2WGJ8 235 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 DNLZQ5SXM8 178 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 FAM216BQ8N7L0 139 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 TMEM18Q96B42 140 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms