RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MSMO1Q15800 293 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 OR4A47Q6IF82 309 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 UNQ9165/PRO28630Q6UXU0 137 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 OR4A5Q8NH83 315 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 LGALS14Q8TCE9 139 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 GGTLC1Q9BX51 225 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
RPS28-201ENST00000417088 RRP15Q9Y3B9 282 aaKnown RBP11.08□□□□□ -0.64
RPS28-201ENST00000417088 MRPS14O60783 128 aaKnown RBP11.07□□□□□ -0.64
RPS28-201ENST00000417088 C8orf88P0DMB2 117 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 FCGR2CP31995 323 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 OR2B8PP59922 312 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 ARPC4P59998 168 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 GABARAPL2P60520 117 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 SFXN4Q6P4A7 337 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 SPAG16Q8N0X2 631 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 GVQW1Q8N7I0 195 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 BEST4Q8NFU0 473 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 SECTM1Q8WVN6 248 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 CXorf58Q96LI9 332 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 HRASLSQ9HDD0 168 aa11.07□□□□□ -0.64
RPS28-201ENST00000417088 TRAV18A0A075B6X5 111 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
RPS28-201ENST00000417088 TRAV3A0A0B4J244 114 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 TRAV25A0A0B4J276 109 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPS28-201ENST00000417088 PPYP01298 95 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 PSMB9P28065 219 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 ANKRD55Q3KP44 614 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 ZNF585BQ52M93 769 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 HOGA1Q86XE5 327 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 SPARTQ8N0X7 666 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 ZBTB34Q8NCN2 500 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 OR13F1Q8NGS4 319 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 MARC2Q969Z3 335 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 AIFM2Q9BRQ8 373 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 SSR3Q9UNL2 185 aa11.06□□□□□ -0.64
RPS28-201ENST00000417088 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 SULT1C2O00338 296 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 UPK2O00526 184 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 CLEC2LP0C7M8 214 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 GPR183P32249 361 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 TAS2R31P59538 309 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 OR5H6Q8NGV6 325 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 SLC25A38Q96DW6 304 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
RPS28-201ENST00000417088 RAB26Q9ULW5 256 aa11.05□□□□□ -0.64
RPS28-201ENST00000417088 HPRT1P00492 218 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 NQO2P16083 231 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPS28-201ENST00000417088 SDC2P34741 201 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
RPS28-201ENST00000417088 MXD1Q05195 221 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
RPS28-201ENST00000417088 OR1L6Q8NGR2 347 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 SRSF8Q9BRL6 282 aaKnown RBP11.04□□□□□ -0.64
RPS28-201ENST00000417088 ZNF436Q9C0F3 470 aaPredicted RBP11.04□□□□□ -0.64
RPS28-201ENST00000417088 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 UFC1Q9Y3C8 167 aa11.04□□□□□ -0.64
RPS28-201ENST00000417088 FCER2P06734 321 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 SCAND1P57086 179 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 FXYD4P59646 89 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 CATR1Q13166 79 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 PLET1Q6UQ28 207 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 ZNF818PQ6ZRF7 136 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 OR2C3Q8N628 320 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 LINC00476Q8WZB0 136 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 FCGR1BQ92637 280 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 COMMD5Q9GZQ3 224 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 RNF167Q9H6Y7 350 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 AUNIPQ9H7T9 357 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 THYN1Q9P016 225 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
RPS28-201ENST00000417088 TGOLN2O43493 480 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 S1PR2O95136 353 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 FGF2P09038 288 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 EWSR1Q01844 656 aaKnown RBP eCLIP11.02□□□□□ -0.65
RPS28-201ENST00000417088 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 OR51H1Q8NH63 302 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 VN1R17PQ8TDU5 208 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 GIMAP1Q8WWP7 306 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 QTRT1Q9BXR0 403 aaKnown RBP11.02□□□□□ -0.65
RPS28-201ENST00000417088 C5orf66Q9H5L9 145 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.65
RPS28-201ENST00000417088 A0A0A6YYH2 397 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 A6NJ64 397 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 TSPAN4O14817 238 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 OR13C7P0DN81 318 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 RPA2P15927 270 aa11.01□□□□□ -0.65
RPS28-201ENST00000417088 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms