RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CCL28Q9NRJ3 127 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 BET1LQ9NYM9 111 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 SSR3Q9UNL2 185 aa10.84□□□□□ -0.67
PAF1-202ENST00000416728 EPPK1P58107 5090 aaKnown RBP10.84□□□□□ -0.67
PAF1-202ENST00000416728 TRBV7-1A0A0A6YYK4 115 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 MYOD1P15172 320 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 FCGR2CP31995 323 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 KLK9Q2XQG4 91 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 SPARTQ8N0X7 666 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 FCGR1BQ92637 280 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 MLXQ9UH92 298 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 DNAH1Q9P2D7 4330 aa10.83□□□□□ -0.68
PAF1-202ENST00000416728 LYSTQ99698 3801 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 TRAV18A0A075B6X5 111 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 MFSD2BA6NFX1 497 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.68
PAF1-202ENST00000416728 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
PAF1-202ENST00000416728 PPYP01298 95 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 CLEC3BP05452 202 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 PTHLHP12272 177 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 CATR1Q13166 79 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 ANKRD55Q3KP44 614 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 BTNL8Q6UX41 500 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 ZBTB34Q8NCN2 500 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 ETV7Q9Y603 341 aa10.82□□□□□ -0.68
PAF1-202ENST00000416728 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 SULT1C2O00338 296 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 GPR183P32249 361 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 SDC2P34741 201 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 SCAND1P57086 179 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 TAS2R31P59538 309 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 OR2B8PP59922 312 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 MXD1Q05195 221 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 HOGA1Q86XE5 327 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 GVQW1Q8N7I0 195 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 MARC2Q969Z3 335 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 COMMD5Q9GZQ3 224 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 SLC5A7Q9GZV3 580 aa10.81□□□□□ -0.68
PAF1-202ENST00000416728 LOC102724200A0A096LPH7 203 aaPredicted RBP10.8□□□□□ -0.68
PAF1-202ENST00000416728 IGLC7A0M8Q6 106 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 HPRT1P00492 218 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 NQO2P16083 231 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 FXYD4P59646 89 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 RBPMS2Q6ZRY4 209 aaKnown RBP10.8□□□□□ -0.68
PAF1-202ENST00000416728 OR5H6Q8NGV6 325 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 SLC25A38Q96DW6 304 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 SRSF8Q9BRL6 282 aaKnown RBP10.8□□□□□ -0.68
PAF1-202ENST00000416728 THYN1Q9P016 225 aa10.8□□□□□ -0.68
PAF1-202ENST00000416728 A0A0A6YYH2 397 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 TRAV3A0A0B4J244 114 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 A6NJ64 397 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 UPK2O00526 184 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 FCER2P06734 321 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 CLEC2LP0C7M8 214 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 POU2AF1Q16633 256 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 ZNF585BQ52M93 769 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 IDNKQ5T6J7 187 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 PLET1Q6UQ28 207 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 DMBX1Q8NFW5 382 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 OR1L6Q8NGR2 347 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 OR51H1Q8NH63 302 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 ZNF502Q8TBZ5 544 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 CD300LFQ8TDQ1 290 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 TMEM140Q9NV12 185 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 MRPL27Q9P0M9 148 aaKnown RBP10.79□□□□□ -0.68
PAF1-202ENST00000416728 UFC1Q9Y3C8 167 aa10.79□□□□□ -0.68
PAF1-202ENST00000416728 IGHV3-35A0A0C4DH35 117 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 CYB5BO43169 146 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 C8orf88P0DMB2 117 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 PTBP1P26599 531 aaKnown RBP eCLIP10.78□□□□□ -0.68
PAF1-202ENST00000416728 ELLP55199 621 aaPredicted RBP10.78□□□□□ -0.68
PAF1-202ENST00000416728 AADACL3Q5VUY0 350 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 ZNF773Q6PK81 442 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 ZNF818PQ6ZRF7 136 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 TMEM17Q86X19 198 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 QTRT1Q9BXR0 403 aaKnown RBP10.78□□□□□ -0.68
PAF1-202ENST00000416728 Q9H521 79 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 AUNIPQ9H7T9 357 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 PLEKHA2Q9HB19 425 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 DIABLOQ9NR28 239 aa10.78□□□□□ -0.68
PAF1-202ENST00000416728 LOC100506127A0A0U1RQW1 187 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 S1PR2O95136 353 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 FGF2P09038 288 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 CBX5P45973 191 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 HERV-K104P61576 105 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.68
PAF1-202ENST00000416728 GDPD1Q8N9F7 314 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 OR5AP2Q8NGF4 316 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 GIMAP1Q8WWP7 306 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 BORCS5Q969J3 196 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 RNF167Q9H6Y7 350 aa10.77□□□□□ -0.68
PAF1-202ENST00000416728 COMMD9Q9P000 198 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms