RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CASTOR1Q8WTX7 329 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 SECTM1Q8WVN6 248 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 ABCG5Q9H222 651 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 FBXL15Q9H469 300 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 SLA2Q9H6Q3 261 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 IFT46Q9NQC8 304 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 PARP11Q9NR21 331 aa3.82□□□□□ -1.8
VPS41-205ENST00000414632 ZNF107Q9UII5 783 aaPredicted RBP3.82□□□□□ -1.8
VPS41-205ENST00000414632 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 A0A0A6YYH2 397 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 CCDC160A6NGH7 325 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 C5orf52A6NGY3 159 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 OR5H14A6NHG9 310 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 A6NJ64 397 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 G3V318 75 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 FCN1O00602 326 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 ITGB1BP1O14713 200 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 ATP6V0E1O15342 81 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 RGS5O15539 181 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 HLA-DQB1P01920 261 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 APOA2P02652 100 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 APELAP0DMC3 54 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 AADACP22760 399 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 HLA-DMAP28067 261 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 FCGR2CP31995 323 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 RFX2P48378 723 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 AMTP48728 403 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 RORCP51449 518 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 LUMP51884 338 aaPredicted RBP3.81□□□□□ -1.8
VPS41-205ENST00000414632 GNB1P62873 340 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 RPL30P62888 115 aaKnown RBP3.81□□□□□ -1.8
VPS41-205ENST00000414632 PITPNAQ00169 270 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 NDPQ00604 133 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS41-205ENST00000414632 ECSCRQ19T08 205 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 C5orf64Q2M2E5 130 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 FAM71F2Q6NXP2 309 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 CNIH2Q6PI25 160 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 Q6ZS49 121 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 Q75L30 129 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 TMEM17Q86X19 198 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 HOGA1Q86XE5 327 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 LAX1Q8IWV1 398 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 STPG2Q8N412 459 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 OR4X2Q8NGF9 303 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 OR5M8Q8NGP6 311 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 BSCL2Q96G97 398 aaPredicted RBP3.81□□□□□ -1.8
VPS41-205ENST00000414632 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 FAM103A1Q9BTL3 118 aaKnown RBP3.81□□□□□ -1.8
VPS41-205ENST00000414632 TOLLIPQ9H0E2 274 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 MIXL1Q9H2W2 232 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 CCL28Q9NRJ3 127 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 SLC35D1Q9NTN3 355 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 TAS2R8Q9NYW2 309 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 EHFQ9NZC4 300 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 METTL1Q9UBP6 276 aaKnown RBP3.81□□□□□ -1.8
VPS41-205ENST00000414632 EXTL2Q9UBQ6 330 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 GAB2Q9UQC2 676 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 WASHC3Q9Y3C0 194 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 FBXO7Q9Y3I1 522 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 OR2W1Q9Y3N9 320 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 WSB1Q9Y6I7 421 aa3.81□□□□□ -1.8
VPS41-205ENST00000414632 IGHV7-81A0A0B4J1V7 117 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 H3BMQ9 156 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 KCNAB3O43448 404 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 NOL3O60936 208 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 FCGR3BO75015 233 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 NDUFA3O95167 84 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 CRYZL1O95825 349 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 CA2P00918 260 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 HLA-DRB1P01911 266 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 APOA1P02647 267 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 RLN1P04808 185 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 VDAC1P21796 283 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 DUTP33316 252 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 PRSS3P35030 304 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 RPL5P46777 297 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 THBS3P49746 956 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 SLC35B1P78383 322 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 DEFA5Q01523 94 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 PJVKQ0ZLH3 352 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 CDK10Q15131 360 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 PSG5Q15238 335 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 DEFB136Q30KP8 78 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 PRR27Q6MZM9 219 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 TMEM182Q6ZP80 229 aaPredicted RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 IDO2Q6ZQW0 420 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 KCTD9Q7L273 389 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 NDUFA11Q86Y39 141 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 ZNF645Q8N7E2 425 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 UXS1Q8NBZ7 420 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 KLHL30-AS1Q8NEE0 82 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms