RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
LINC00116-201ENST00000414416 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
LINC00116-201ENST00000414416 RNF126Q9BV68 326 aa12.4□□□□□ -0.42
LINC00116-201ENST00000414416 MRPL20Q9BYC9 149 aaKnown RBP12.4□□□□□ -0.42
LINC00116-201ENST00000414416 SMCO4Q9NRQ5 59 aa12.4□□□□□ -0.42
LINC00116-201ENST00000414416 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
LINC00116-201ENST00000414416 SONP18583 2426 aaKnown RBP12.4□□□□□ -0.43
LINC00116-201ENST00000414416 ZFHX3Q15911 3703 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 A0A1W2PPI3 338 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 CDS2O95674 445 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 CT45A6P0DMU7 189 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 CT45A5P0DMU8 189 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 CT45A7P0DMV0 189 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 UCP1P25874 307 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 PSMB6P28072 239 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 DUTP33316 252 aaKnown RBP12.39□□□□□ -0.43
LINC00116-201ENST00000414416 TAS2R60P59551 318 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF66Q6ZN08 573 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 ZFP82Q8N141 532 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 OR2F2O95006 317 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 IFNA21P01568 189 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
LINC00116-201ENST00000414416 EIF4EBP1Q13541 118 aaPredicted RBP12.39□□□□□ -0.43
LINC00116-201ENST00000414416 OR2F1Q13607 317 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 RAB32Q13637 225 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 NABP2Q9BQ15 211 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 MAST4O15021 2626 aa12.39□□□□□ -0.43
LINC00116-201ENST00000414416 H0Y980 276 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 TIMM23O14925 209 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 SLC25A4P12235 298 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 SRD5A1P18405 259 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 THBS3P49746 956 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 RPL30P62888 115 aaKnown RBP12.38□□□□□ -0.43
LINC00116-201ENST00000414416 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 DEFB112Q30KQ8 113 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 MEGF9Q9H1U4 602 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 LINC00473A8K010 186 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 IFNA10P01566 189 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 CATR1Q13166 79 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 KCNRGQ8N5I3 272 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 OR5AC2Q9NZP5 309 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 CBY1Q9Y3M2 126 aa12.38□□□□□ -0.43
LINC00116-201ENST00000414416 NAV3Q8IVL0 2385 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 COLCA2A8K830 154 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 BCL2L11O43521 198 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 IGKV1-39P01597 117 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 IGKV1D-39P04432 117 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 RAB5CP51148 216 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF585BQ52M93 769 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 TNFSF18Q9UNG2 199 aa12.37□□□□□ -0.43
LINC00116-201ENST00000414416 ANK3Q12955 4377 aaKnown RBP12.37□□□□□ -0.43
LINC00116-201ENST00000414416 H0YJW9 148 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 BRS3P32247 399 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 CD81P60033 236 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 S100A10P60903 97 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 OR5AN1Q8NGI8 311 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 CFHR4Q92496 578 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 TMED3Q9Y3Q3 217 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 A0A0G2JRQ6 117 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 RNF222A6NCQ9 220 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 APOA2P02652 100 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 MC5RP33032 325 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 DDB2Q92466 427 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 RRNAD1Q96FB5 475 aaKnown RBP12.36□□□□□ -0.43
LINC00116-201ENST00000414416 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
LINC00116-201ENST00000414416 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
LINC00116-201ENST00000414416 RAMP3O60896 148 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 SCGB1D2O95969 90 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 ADCYAP1P18509 176 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 CD1BP29016 333 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 DYNLT3P51808 116 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 SRPXP78539 464 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 ZNF48Q96MX3 618 aaPredicted RBP12.35□□□□□ -0.43
LINC00116-201ENST00000414416 SSX3Q99909 188 aa12.35□□□□□ -0.43
LINC00116-201ENST00000414416 FGF16O43320 207 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 FCGR3BO75015 233 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
LINC00116-201ENST00000414416 SERPINE2P07093 398 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 CD24P25063 80 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 NMSQ5H8A3 153 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 DCUN1D4Q92564 292 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms