RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SCGB1D4Q6XE38 83 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 RNASEH2CQ8TDP1 164 aaKnown RBP14.54□□□□□ -0.08
PHRF1-202ENST00000413872 PHLDA3Q9Y5J5 127 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 SHISA3A0PJX4 238 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 ARL14EPLP0DKL9 152 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 CX3CL1P78423 397 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 C21orf62Q9NYP8 219 aa14.54□□□□□ -0.08
PHRF1-202ENST00000413872 ARHGEF17Q96PE2 2063 aaPredicted RBP14.54□□□□□ -0.08
PHRF1-202ENST00000413872 RLFQ13129 1914 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 TRBV6-7A0A0A0MS04 114 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 GPX1P07203 203 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 DLX1P56177 255 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 H2BFSP57053 126 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 C20orf204Q6ZNR8 217 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 TNFRSF14Q92956 283 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 AURKAIP1Q9NWT8 199 aaPredicted RBP14.53□□□□□ -0.08
PHRF1-202ENST00000413872 INTS1Q8N201 2190 aaKnown RBP14.53□□□□□ -0.08
PHRF1-202ENST00000413872 TMEM133Q9H2Q1 129 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 NMBP08949 121 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 MRPL20Q9BYC9 149 aaKnown RBP14.53□□□□□ -0.08
PHRF1-202ENST00000413872 HLA-DQA1P01909 254 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 KLK2P20151 261 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 CRYGSP22914 178 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 Q6ZS92 163 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 CLDND2Q8NHS1 167 aa14.53□□□□□ -0.08
PHRF1-202ENST00000413872 ANOS1P23352 680 aa14.52□□□□□ -0.08
PHRF1-202ENST00000413872 MBNL2Q5VZF2 373 aaKnown RBP14.52□□□□□ -0.08
PHRF1-202ENST00000413872 CBLN2Q8IUK8 224 aa14.52□□□□□ -0.08
PHRF1-202ENST00000413872 C17orf98A8MV24 154 aa14.52□□□□□ -0.09
PHRF1-202ENST00000413872 C1QL1O75973 258 aa14.52□□□□□ -0.09
PHRF1-202ENST00000413872 GCGP01275 180 aa14.52□□□□□ -0.09
PHRF1-202ENST00000413872 SNRPCP09234 159 aaKnown RBP14.52□□□□□ -0.09
PHRF1-202ENST00000413872 TRGC1P0CF51 173 aa14.52□□□□□ -0.09
PHRF1-202ENST00000413872 CD99P14209 185 aa14.52□□□□□ -0.09
PHRF1-202ENST00000413872 DANCRP0C864 163 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 MEOX2P50222 304 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 NBR2O15453 112 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 PEAR1Q5VY43 1037 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-202ENST00000413872 ZSWIM8A7E2V4 1837 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 PTBP3O95758 552 aaKnown RBP14.51□□□□□ -0.09
PHRF1-202ENST00000413872 AMMECR1LQ6DCA0 310 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 FAM53AQ6NSI3 398 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-202ENST00000413872 ST6GALNAC3Q8NDV1 305 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 PLPPR1Q8TBJ4 325 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 AP5S1Q9NUS5 200 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 HIST1H2BAQ96A08 127 aa14.51□□□□□ -0.09
PHRF1-202ENST00000413872 IGHV3OR16-12A0A075B7B8 117 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 CGB1A6NKQ9 187 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 RBFOX2O43251 390 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■■■□□ 17.5
PHRF1-202ENST00000413872 EFNA2O43921 213 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 TMEM177Q53S58 311 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MESP1Q9BRJ9 268 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 PRSS22Q9GZN4 317 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 CKS2P33552 79 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 FOXF2Q12947 444 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 ZNF497Q6ZNH5 498 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 IGHV1-46P01743 117 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 GCHFRP30047 84 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 SIP14410 1827 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MBD3L4A6NDZ8 208 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MBD3L3A6NE82 208 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MBD3L5A6NJ08 208 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-202ENST00000413872 UBE2L6O14933 153 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 SIGLEC5O15389 551 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 IGHG3P01860 377 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MST1P26927 711 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 EFNA4P52798 201 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 Q0VFX4 171 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 LINC00305Q7Z4B0 112 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 MBD3L2Q8NHZ7 208 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-202ENST00000413872 LYZL4Q96KX0 146 aa14.5□□□□□ -0.09
PHRF1-202ENST00000413872 IL6RP08887 468 aaPredicted RBP14.49□□□□□ -0.09
PHRF1-202ENST00000413872 C2orf68Q2NKX9 166 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 SMUG1Q53HV7 270 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 FAM89BQ8N5H3 189 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 CCL3L1P16619 93 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 ANK1P16157 1881 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 IGKV1-9A0A0C4DH69 117 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 PROB1E7EW31 1015 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 C19orf54Q5BKX5 351 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 ZNF385CQ66K41 422 aaPredicted RBP14.49□□□□□ -0.09
PHRF1-202ENST00000413872 GTF2H5Q6ZYL4 71 aa14.49□□□□□ -0.09
PHRF1-202ENST00000413872 TMEM250H0YL14 139 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 RNF151Q2KHN1 245 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 FAM159AQ6UWV7 190 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 OR8A1Q8NGG7 326 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 PACRGQ96M98 296 aaPredicted RBP14.48□□□□□ -0.09
PHRF1-202ENST00000413872 PEMTQ9UBM1 199 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 CRYBB3P26998 211 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 BET1LQ9NYM9 111 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 METRNQ9UJH8 293 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 GPX4P36969 197 aaPredicted RBP14.48□□□□□ -0.09
PHRF1-202ENST00000413872 MORN2Q502X0 79 aa14.48□□□□□ -0.09
PHRF1-202ENST00000413872 SRRM5B3KS81 715 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 MYOD1P15172 320 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 CD81P60033 236 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 HIST1H1AQ02539 215 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 NPCDR1Q9BY65 106 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 FNDC1Q4ZHG4 1894 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 UPK2O00526 184 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms