RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ARSJQ5FYB0 599 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-202ENST00000413219 OR10J3Q5JRS4 329 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 LRP11Q86VZ4 500 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 UBALD2Q8IYN6 164 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 SIGLECL1Q8N7X8 197 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 VN1R17PQ8TDU5 208 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 CORO2AQ92828 525 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 S1PR3Q99500 378 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 TMEM140Q9NV12 185 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 ZNF586Q9NXT0 402 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 SPRR3Q9UBC9 169 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 GNG12Q9UBI6 72 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PAM16Q9Y3D7 125 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PRR20EP86478 221 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PRR20CP86479 221 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PRR20DP86480 221 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PRR20BP86481 221 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 PRR20AP86496 221 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 SPATA31B1PQ5VZV4 182 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 GCNT2Q8N0V5 402 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 CD177Q8N6Q3 437 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 TMEM105Q8N8V8 129 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 RNF2Q99496 336 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 DCTN5Q9BTE1 182 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 DEFB127Q9H1M4 99 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 C15orf61A6NNL5 157 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 MMP23AO75900 390 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 GPX1P07203 203 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 CX3CL1P78423 397 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 RELQ04864 619 aaPredicted RBP14.55□□□□□ -0.08
SDCBP-202ENST00000413219 OSTCQ9NRP0 149 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 TMEM167BQ9NRX6 74 aa14.55□□□□□ -0.08
SDCBP-202ENST00000413219 TRAV3A0A0B4J244 114 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 TIMM8AO60220 97 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-202ENST00000413219 LYZL6O75951 148 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 CD46P15529 392 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 NPY1RP25929 384 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 PRDX2P32119 198 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 HOXA4Q00056 320 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-202ENST00000413219 TMPRSS7Q7RTY8 843 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 OR4S2Q8NH73 311 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 GNB4Q9HAV0 340 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 LPAR2Q9HBW0 351 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 FOXJ2Q9P0K8 574 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 FOXA2Q9Y261 457 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-202ENST00000413219 F2RL2O00254 374 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 IGKV3-15P01624 115 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 GNG4P50150 75 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 MZT1Q08AG7 82 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 VKORC1L1Q8N0U8 176 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 OR8I2Q8N0Y5 310 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 SLC24A4Q8NFF2 622 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 OR4P4Q8NGL7 312 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 DDB2Q92466 427 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 DCAF16Q9NXF7 216 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 IL19Q9UHD0 177 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 SLC45A2Q9UMX9 530 aa14.54□□□□□ -0.08
SDCBP-202ENST00000413219 HELTA6NFD8 242 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 F2Z2F3 143 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 ITGB1BP1O14713 200 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 FOXH1O75593 365 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 OR5G3P0C626 314 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 HSPE1P61604 102 aaKnown RBP14.53□□□□□ -0.08
SDCBP-202ENST00000413219 EDDM3AQ14507 147 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 LTC4SQ16873 150 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 Q6ZT83 130 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 ST6GALNAC3Q8NDV1 305 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 PPP1R35Q8TAP8 253 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 RBM14Q96PK6 669 aaKnown RBP14.53□□□□□ -0.08
SDCBP-202ENST00000413219 IFI27L2Q9H2X8 130 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 TMEM265A0A087WTH1 108 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 A6NNC1 897 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 MGST3O14880 152 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 CGAP01215 116 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 REG1AP05451 166 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 RPL39P5Q59GN2 51 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 CENPWQ5EE01 88 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 Q8N976 141 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 LRRC29Q8WV35 223 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 NEUROG1Q92886 237 aa14.53□□□□□ -0.08
SDCBP-202ENST00000413219 DOCK7Q96N67 2140 aa14.52□□□□□ -0.08
SDCBP-202ENST00000413219 DNAJC13O75165 2243 aa14.52□□□□□ -0.08
SDCBP-202ENST00000413219 LINC00869P0C866 280 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 LOXL3P58215 753 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 COL5A1-AS1Q5SY13 56 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 TMEM136Q6ZRR5 245 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 C1orf174Q8IYL3 243 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 KCNS1Q96KK3 526 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 FAM234AQ9H0X4 552 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 ENY2Q9NPA8 101 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 TMEM14BQ9NUH8 114 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 NAT8BQ9UHF3 227 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 WDFY3Q8IZQ1 3526 aa14.52□□□□□ -0.09
SDCBP-202ENST00000413219 DIRC3C9JPN6 131 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 SFTPCP11686 197 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 CTRLP40313 264 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 RAB7AP51149 207 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 OR5I1Q13606 314 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms