RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 COA4Q9NYJ1 87 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 BCL2P10415 239 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 CD24P25063 80 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 CCKARP32238 428 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
PTPRF-204ENST00000412568 PAX5Q02548 391 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 PNKDQ8N490 385 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 OR2T6Q8NHC8 308 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 RPRMQ9NS64 109 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 CYB5R2Q6BCY4 276 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 DHRS7BQ6IAN0 325 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-204ENST00000412568 GCSAMQ8N6F7 178 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 DIRC2Q96SL1 478 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 TIMM9Q9Y5J7 89 aa9.38□□□□□ -0.91
PTPRF-204ENST00000412568 BMPR1BO00238 502 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 F2RL2O00254 374 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 SLC25A5P05141 298 aaKnown RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 EGR1P18146 543 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 OR10J1P30954 320 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 ZNF343Q6P1L6 599 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 TEPPQ6URK8 271 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 C1orf147Q96MC9 270 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 WFIKKN1Q96NZ8 548 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 AMMECR1Q9Y4X0 333 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 A0A0G2JNJ9 132 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 TCF21O43680 179 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 NEUROG1Q92886 237 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 ELOVL5Q9NYP7 299 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 Q9UFV3 132 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 S4R3C0 116 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 TRBV6-7A0A0A0MS04 114 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 CSN1S1P47710 185 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 GNG4P50150 75 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 FAM53AQ6NSI3 398 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 MRPL54Q6P161 138 aaKnown RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 EAF1Q96JC9 268 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-204ENST00000412568 GGACTQ9BVM4 153 aa9.37□□□□□ -0.91
PTPRF-204ENST00000412568 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 H3BTX0 84 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 K7EQM0 130 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 MLNRO43193 412 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 GNG7O60262 68 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 CD55P08174 381 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SFTPCP11686 197 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 ERVFRD-1P60508 538 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 FAM122AQ96E09 287 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SLC25A15Q9Y619 301 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 PTPRSQ13332 1948 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 B9A039 149 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 IGHV1-46P01743 117 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SPCS3P61009 180 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SMIM8Q96KF7 97 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 METTL1Q9UBP6 276 aaKnown RBP9.36□□□□□ -0.91
PTPRF-204ENST00000412568 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
PTPRF-204ENST00000412568 CDX1P47902 265 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-204ENST00000412568 TCF15Q12870 199 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 C16orf82Q7Z2V1 217 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 EIF4E3Q8N5X7 224 aaKnown RBP9.36□□□□□ -0.91
PTPRF-204ENST00000412568 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 SLC45A2Q9UMX9 530 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
PTPRF-204ENST00000412568 IGHG3P01860 377 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 IER3P46695 156 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 FAM3BP58499 235 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-204ENST00000412568 TMEM42Q69YG0 159 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 LSM10Q969L4 123 aaKnown RBP9.35□□□□□ -0.91
PTPRF-204ENST00000412568 SPSB4Q96A44 273 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 ABCA2Q9BZC7 2435 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 WIPF3A6NGB9 483 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 CSN3P07498 182 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 CFPP27918 469 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 FAM90A1Q86YD7 464 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 REG4Q9BYZ8 158 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 NPVFQ9HCQ7 196 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 SNURFLB1AK76 121 aa9.35□□□□□ -0.91
PTPRF-204ENST00000412568 HSPE1P61604 102 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms