RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 ISOC1Q96CN7 298 aa13.31□□□□□ -0.28
HSPG2-204ENST00000412328 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
HSPG2-204ENST00000412328 PRR25Q96S07 402 aa13.31□□□□□ -0.28
HSPG2-204ENST00000412328 HUWE1Q7Z6Z7 4374 aaKnown RBP13.31□□□□□ -0.28
HSPG2-204ENST00000412328 ACTL6BO94805 426 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 CD3DP04234 171 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 KLF5Q13887 457 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-204ENST00000412328 IL34Q6ZMJ4 242 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 ZNF429Q86V71 674 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 DGCR14Q96DF8 476 aaKnown RBP13.3□□□□□ -0.28
HSPG2-204ENST00000412328 RBM38Q9H0Z9 239 aaKnown RBP13.3□□□□□ -0.28
HSPG2-204ENST00000412328 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-204ENST00000412328 FAM212BQ9NTI7 297 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-204ENST00000412328 CEPT1Q9Y6K0 416 aa13.3□□□□□ -0.28
HSPG2-204ENST00000412328 IGLV11-55A0A075B6I3 123 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 GABARAPH6UMI1 98 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 BMPR1BO00238 502 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 MPPED1O15442 326 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 TBPP20226 339 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 PSMB6P28072 239 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 EXOSC2Q13868 293 aaKnown RBP13.29□□□□□ -0.28
HSPG2-204ENST00000412328 PHLDA2Q53GA4 152 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 NECAP1Q8NC96 275 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 SMIM4Q8WVI0 70 aa13.29□□□□□ -0.28
HSPG2-204ENST00000412328 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
HSPG2-204ENST00000412328 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
HSPG2-204ENST00000412328 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-204ENST00000412328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.28□□□□□ -0.28
HSPG2-204ENST00000412328 SAP30O75446 220 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 ZP3P21754 424 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 PTBP1P26599 531 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■■■■ 27.4
HSPG2-204ENST00000412328 ECI1P42126 302 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 TBC1D26Q86UD7 250 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 CMTM1Q8IZ96 169 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 ARRDC1Q8N5I2 433 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 CCDC140Q96MF4 163 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 FYTTD1Q96QD9 318 aaKnown RBP13.28□□□□□ -0.28
HSPG2-204ENST00000412328 AIFM2Q9BRQ8 373 aa13.28□□□□□ -0.28
HSPG2-204ENST00000412328 CTDSPLO15194 276 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 RGS5O15539 181 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 OR2J3O76001 311 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 REG1AP05451 166 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 RPA2P15927 270 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 LPAR6P43657 344 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 RND3P61587 244 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 TSPAN5P62079 268 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 C15orf32Q32M92 178 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 RNASE10Q5GAN6 216 aaKnown RBP13.27□□□□□ -0.29
HSPG2-204ENST00000412328 HAPLN4Q86UW8 402 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 TMEM229BQ8NBD8 167 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 B9D2Q9BPU9 175 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 HRASLSQ9HDD0 168 aa13.27□□□□□ -0.29
HSPG2-204ENST00000412328 ZMAT5Q9UDW3 170 aaKnown RBP13.27□□□□□ -0.29
HSPG2-204ENST00000412328 DBX1A6NMT0 343 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 NDUFB8O95169 186 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 G6PCP35575 357 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 MRPS10P82664 201 aaKnown RBP13.26□□□□□ -0.29
HSPG2-204ENST00000412328 SSBP1Q04837 148 aaKnown RBP13.26□□□□□ -0.29
HSPG2-204ENST00000412328 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 DMBX1Q8NFW5 382 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 SEC22AQ96IW7 307 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 SOSTQ9BQB4 213 aa13.26□□□□□ -0.29
HSPG2-204ENST00000412328 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
HSPG2-204ENST00000412328 P0C879 139 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 SPNP16150 400 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 TAS2R19P59542 299 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 LPCAT3Q6P1A2 487 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 OR9G4Q8NGQ1 327 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 ZNF486Q96H40 463 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-204ENST00000412328 QTRT1Q9BXR0 403 aaKnown RBP13.25□□□□□ -0.29
HSPG2-204ENST00000412328 NDUFA4L2Q9NRX3 87 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 DNAH7Q8WXX0 4024 aa13.25□□□□□ -0.29
HSPG2-204ENST00000412328 TENM3Q9P273 2699 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 C15orf61A6NNL5 157 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 KRASP01116 189 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 CSN3P07498 182 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 PI3P19957 117 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 PPP5CP53041 499 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 TMEM14BQ9NUH8 114 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 FBXL7Q9UJT9 491 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 NSG2Q9Y328 171 aa13.24□□□□□ -0.29
HSPG2-204ENST00000412328 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
HSPG2-204ENST00000412328 MFSD2BA6NFX1 497 aa13.23□□□□□ -0.29
HSPG2-204ENST00000412328 PPP5D1E7EU14 171 aa13.23□□□□□ -0.29
HSPG2-204ENST00000412328 GSTZ1O43708 216 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-204ENST00000412328 MFAP2P55001 183 aa13.23□□□□□ -0.29
HSPG2-204ENST00000412328 ERVK-16P61578 105 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms