RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 UPK2O00526 184 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 MC5RP33032 325 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OPRK1P41145 380 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 PSMB3P49720 205 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 RAB13P51153 203 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 AVPI1Q5T686 147 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
LIMS1-205ENST00000410093 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR13D1Q8NGV5 346 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 OR9G1Q8NH87 305 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 TXNDC17Q9BRA2 123 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 NPVFQ9HCQ7 196 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 MLXQ9UH92 298 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
LIMS1-205ENST00000410093 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
LIMS1-205ENST00000410093 MEX3AA1L020 520 aaKnown RBP11.1□□□□□ -0.63
LIMS1-205ENST00000410093 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 DVL1O14640 695 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 MAS1LP35410 378 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 GNG10P50151 68 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 LINC00205P59089 165 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 ZNF726P1Q15940 193 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 MUC15Q8N387 334 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 RPP25LQ8N5L8 163 aaKnown RBP11.1□□□□□ -0.63
LIMS1-205ENST00000410093 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 RXFP4Q8TDU9 374 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 SPTAN1Q13813 2472 aaKnown RBP11.1□□□□□ -0.63
LIMS1-205ENST00000410093 DOCK11Q5JSL3 2073 aa11.1□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1B0GV50 99 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 COLCA2A8K830 154 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 H3BQ15 152 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 J3QR06 171 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 KBTBD11O94819 623 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 SNRNP70P08621 437 aaKnown RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 USF1P22415 310 aaPredicted RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 NPY1RP25929 384 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 HIST2H2BCQ6DN03 193 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 LEAP2Q969E1 77 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 PLEKHA3Q9HB20 300 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 TMEM242Q9NWH2 141 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 YLPM1P49750 1951 aaKnown RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 hCG_1809904A0A1W2PP81 198 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1W2PPE2 198 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1W2PR64 198 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1W2PRV1 198 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 IFNA4P05014 189 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 CTRB1P17538 263 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 COL8A1P27658 744 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 ELLP55199 621 aaPredicted RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 DLX6P56179 175 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
LIMS1-205ENST00000410093 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 CA5BP1Q8WTZ4 195 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 RAB1BQ9H0U4 201 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
LIMS1-205ENST00000410093 A0A1W2PN81 502 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 A0A1W2PPE3 182 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 FAM90A27PA6NNH2 459 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 CYSRT1A8MQ03 144 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 MMP23AO75900 390 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 TSPAN9O75954 239 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 IGHV3-7P01780 117 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 CHRNA7P36544 502 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 PRRX1P54821 245 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 MEF2BQ02080 365 aaPredicted RBP11.08□□□□□ -0.64
LIMS1-205ENST00000410093 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 VKORC1L1Q8N0U8 176 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 ZCCHC24Q8N2G6 241 aaKnown RBP11.08□□□□□ -0.64
LIMS1-205ENST00000410093 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 NANPQ8TBE9 248 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
LIMS1-205ENST00000410093 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
LIMS1-205ENST00000410093 PUS1Q9Y606 427 aaKnown RBP eCLIP11.08□□□□□ -0.64
LIMS1-205ENST00000410093 ARFGEF3Q5TH69 2177 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms