RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FAM71F2Q6NXP2 309 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 SLC24A4Q8NFF2 622 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 BET1LQ9NYM9 111 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 VAX2Q9UIW0 290 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 FSTL3O95633 263 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 APOA2P02652 100 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 IFNA4P05014 189 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 C11orf42Q8N5U0 333 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 ST6GALNAC6Q969X2 333 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 ACTR3CQ9C0K3 210 aaPredicted RBP16.38■□□□□ 0.21
USP39-204ENST00000409766 ENY2Q9NPA8 101 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 KBTBD11O94819 623 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 SAA1P0DJI8 122 aaPredicted RBP16.38■□□□□ 0.21
USP39-204ENST00000409766 NPY1RP25929 384 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 ABCA4P78363 2273 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 FAM90A2PQ658T7 463 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 TMEM186Q96B77 213 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 P2RX4Q99571 388 aa16.38■□□□□ 0.21
USP39-204ENST00000409766 TRBV23-1A0A0A0MS06 115 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 SMCO3A2RU48 225 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 HMGB3O15347 200 aaKnown RBP16.37■□□□□ 0.21
USP39-204ENST00000409766 IFNA1P01562 189 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 IGHV1-8P0DP01 117 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 REG1BP48304 166 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 PRCDQ00LT1 54 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 FLI1Q01543 452 aaPredicted RBP16.37■□□□□ 0.21
USP39-204ENST00000409766 DIAPH2-AS1Q14236 149 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 FAM122CQ6P4D5 195 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 RAB24Q969Q5 203 aa16.37■□□□□ 0.21
USP39-204ENST00000409766 CA2P00918 260 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 CRYBA1P05813 215 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 PPOXP50336 477 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 ZNF137PP52743 207 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 ACOT6Q3I5F7 207 aaPredicted RBP16.36■□□□□ 0.21
USP39-204ENST00000409766 SMUG1Q53HV7 270 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 TMEM177Q53S58 311 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 RBMS3Q6XE24 437 aaKnown RBP16.36■□□□□ 0.21
USP39-204ENST00000409766 OR9G1Q8NH87 305 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 NIPSNAP3BQ9BS92 247 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
USP39-204ENST00000409766 TEX50A0A1B0GTY4 177 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 CYB5BO43169 146 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 SOX15O60248 233 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 IGHV2-70P01814 119 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 OPRK1P41145 380 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 ISOC2Q96AB3 205 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 C1orf159Q96HA4 380 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 HARBI1Q96MB7 349 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 MGST2Q99735 147 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 NABP2Q9BQ15 211 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 HINT2Q9BX68 163 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 TMPRSS5Q9H3S3 457 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 FKBP11Q9NYL4 201 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 MLXQ9UH92 298 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 LSM4Q9Y4Z0 139 aaKnown RBP16.36■□□□□ 0.21
USP39-204ENST00000409766 DCHS2Q6V1P9 2916 aa16.36■□□□□ 0.21
USP39-204ENST00000409766 COL6A6A6NMZ7 2263 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 LY6DQ14210 128 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 ARSJQ5FYB0 599 aaPredicted RBP16.35■□□□□ 0.21
USP39-204ENST00000409766 AVPI1Q5T686 147 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 SLC35E3Q7Z769 313 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 HIST1H2BAQ96A08 127 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 FLYWCH2Q96CP2 140 aaKnown RBP16.35■□□□□ 0.21
USP39-204ENST00000409766 TVP23CQ96ET8 276 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 PLEKHA3Q9HB20 300 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 NPVFQ9HCQ7 196 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 ITPR1Q14643 2758 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 TPRP12270 2363 aaKnown RBP16.35■□□□□ 0.21
USP39-204ENST00000409766 SEC14L6B5MCN3 397 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 DEFA4P12838 97 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 OR5B3Q8NH48 314 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 GGTLC1Q9BX51 225 aa16.35■□□□□ 0.21
USP39-204ENST00000409766 A0A1W2PPE2 198 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 OPN1MWP04001 364 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 OPN1MW2P0DN77 364 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 OPN1MW3P0DN78 364 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 GCSAMLQ5JQS6 135 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 PDPNQ86YL7 162 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 OR4C13Q8NGP0 309 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 TMEM133Q9H2Q1 129 aa16.34■□□□□ 0.21
USP39-204ENST00000409766 YIF1AO95070 293 aa16.33■□□□□ 0.21
USP39-204ENST00000409766 MT-ND4LP03901 98 aa16.33■□□□□ 0.21
USP39-204ENST00000409766 FOLR2P14207 255 aa16.33■□□□□ 0.21
USP39-204ENST00000409766 CDC34P49427 236 aaPredicted RBP16.33■□□□□ 0.21
USP39-204ENST00000409766 CD81P60033 236 aa16.33■□□□□ 0.21
USP39-204ENST00000409766 MEF2BQ02080 365 aaPredicted RBP16.33■□□□□ 0.21
USP39-204ENST00000409766 HRNRQ86YZ3 2850 aaPredicted RBP16.33■□□□□ 0.2
USP39-204ENST00000409766 A0A1W2PPH5 198 aa16.33■□□□□ 0.2
USP39-204ENST00000409766 SFTPCP11686 197 aa16.33■□□□□ 0.2
USP39-204ENST00000409766 TAGLN2P37802 199 aaKnown RBP16.33■□□□□ 0.2
USP39-204ENST00000409766 PCGF1Q9BSM1 259 aa16.33■□□□□ 0.2
USP39-204ENST00000409766 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
USP39-204ENST00000409766 A0A087WWC5 75 aa16.32■□□□□ 0.2
USP39-204ENST00000409766 RAB1CQ92928 201 aa16.32■□□□□ 0.2
USP39-204ENST00000409766 MANBALQ9NQG1 85 aa16.32■□□□□ 0.2
USP39-204ENST00000409766 PXMP4Q9Y6I8 212 aa16.32■□□□□ 0.2
USP39-204ENST00000409766 CTRB1P17538 263 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 PSMB3P49720 205 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms