RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-206ENST00000409754 ZP3P21754 424 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 F2RL1P55085 397 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 PJVKQ0ZLH3 352 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 TMEM182Q6ZP80 229 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-206ENST00000409754 Q8N7P7 452 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 HRH4Q9H3N8 390 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 FKBP11Q9NYL4 201 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 OR51B2Q9Y5P1 312 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 KBTBD11O94819 623 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 IGHV2-5P01817 119 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 PRH1P02810 166 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 PAX1P15863 534 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 COX7A1P24310 79 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 CAMLGP49069 296 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-206ENST00000409754 RUNX1Q01196 453 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 DEFB113Q30KQ7 82 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 C1orf122Q6ZSJ8 110 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 OR4P4Q8NGL7 312 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 OR4A5Q8NH83 315 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-206ENST00000409754 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
LIMS2-206ENST00000409754 HEYLQ9NQ87 328 aaPredicted RBP11.4□□□□□ -0.58
LIMS2-206ENST00000409754 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
LIMS2-206ENST00000409754 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 DLX1P56177 255 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 ARF6P62330 175 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 THNSL2Q86YJ6 484 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 PNKDQ8N490 385 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 OR11H6Q8NGC7 330 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 VSTM2AQ8TAG5 236 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 ENY2Q9NPA8 101 aa11.39□□□□□ -0.59
LIMS2-206ENST00000409754 IFNA10P01566 189 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 PRTN3P24158 256 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 LGALS7P47929 136 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 RPS16P62249 146 aaKnown RBP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 AKR1C8PQ5T2L2 129 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 DPPA3Q6W0C5 159 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 COMMD1Q8N668 190 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 OR5B3Q8NH48 314 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 TMEM167AQ8TBQ9 72 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 RBMXL1Q96E39 390 aaKnown RBP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 LINC00052Q96N35 136 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 MS4A7Q9GZW8 240 aaPredicted RBP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 UQCC1Q9NVA1 299 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 RFNGQ9Y644 331 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 ACANP16112 2415 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 UBE2L5PA0A1B0GUS4 154 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 IGLV2-23P01705 113 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 USF1P22415 310 aaPredicted RBP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 FHITP49789 147 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 PDLIM4P50479 330 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 ZNF616Q08AN1 781 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 FAM213BQ8TBF2 198 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 TAF15Q92804 592 aaKnown RBP eCLIP11.38□□□□□ -0.59
LIMS2-206ENST00000409754 RPEQ96AT9 228 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 PERPQ96FX8 193 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 TIMM9Q9Y5J7 89 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 INSIG2Q9Y5U4 225 aa11.38□□□□□ -0.59
LIMS2-206ENST00000409754 IGHV1-3A0A0C4DH29 117 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 TSPAN15O95858 294 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 ZFP36P26651 326 aaKnown RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 RAB11AP62491 216 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 SERF2P84101 59 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 BPIFCQ8NFQ6 507 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 RSG1Q9BU20 258 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 BPESC1Q9GZL8 116 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 PLEKHA3Q9HB20 300 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 SIRT7Q9NRC8 400 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 KPTNQ9Y664 436 aa11.37□□□□□ -0.59
LIMS2-206ENST00000409754 TET2Q6N021 2002 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-206ENST00000409754 RRHO14718 337 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 MYOD1P15172 320 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
LIMS2-206ENST00000409754 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 ETV3LQ6ZN32 361 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 FOXC2Q99958 501 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 FBXO7Q9Y3I1 522 aa11.36□□□□□ -0.59
LIMS2-206ENST00000409754 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
LIMS2-206ENST00000409754 PRSS46E5RG02 174 aa11.35□□□□□ -0.59
LIMS2-206ENST00000409754 MDKP21741 143 aaPredicted RBP11.35□□□□□ -0.59
LIMS2-206ENST00000409754 NPY1RP25929 384 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms