RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 DHFRP00374 187 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 HIST1H1BP16401 226 aaKnown RBP6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 GALP22466 123 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 PSMB6P28072 239 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 BRWD1-AS2P59051 145 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 ZNF57Q68EA5 555 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 C22orf42Q6IC83 251 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 TCTEX1D2Q8WW35 142 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 EEF1AKMT3Q96AZ1 226 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 CCDC140Q96MF4 163 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 BLOC1S6Q9UL45 172 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 SPATA2Q9UM82 520 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 SELENOKQ9Y6D0 94 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 S4R3C0 116 aa6.87□□□□□ -1.31
NIF3L1-203ENST00000409129 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 SMIM30A4D0T7 59 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 NOTOA8MTQ0 251 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 A8MWP6 167 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 SSX5O60225 188 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 HRASP01112 189 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 DEFA4P12838 97 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 AREGP15514 252 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 CTRB1P17538 263 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 ADMP35318 185 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 CTRB2Q6GPI1 263 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 OR4A47Q6IF82 309 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 ZNF66Q6ZN08 573 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 SSX9Q7RTT3 188 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 UXS1Q8NBZ7 420 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 OR52B4Q8NGK2 314 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 TAS2R8Q9NYW2 309 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 MLXQ9UH92 298 aa6.86□□□□□ -1.31
NIF3L1-203ENST00000409129 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 LOC102724200A0A096LPH7 203 aaPredicted RBP6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 TRBV7-1A0A0A6YYK4 115 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 SCGNO76038 276 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 LY6G6CO95867 125 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 REG1AP05451 166 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 CLEC3BP05452 202 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 MYOD1P15172 320 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 HLA-GP17693 338 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 GNG2P59768 71 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 GABARAPL2P60520 117 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 TM4SF20Q53R12 229 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 CXorf58Q96LI9 332 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 GPHA2Q96T91 129 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 OVOL2Q9BRP0 275 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 AIFM2Q9BRQ8 373 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 KRTAP9-2Q9BYQ4 174 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 BET1LQ9NYM9 111 aa6.85□□□□□ -1.31
NIF3L1-203ENST00000409129 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 MFSD2BA6NFX1 497 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 CGB1A6NKQ9 187 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 TNFSF12O43508 249 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 C8orf88P0DMB2 117 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 PSMB9P28065 219 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 FGF9P31371 208 aaPredicted RBP6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 FCGR2CP31995 323 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 OR2B8PP59922 312 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 MSMO1Q15800 293 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 ZNF585BQ52M93 769 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 UNQ9165/PRO28630Q6UXU0 137 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 TPRA1Q86W33 373 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 SECTM1Q8WVN6 248 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 MARC2Q969Z3 335 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 HRASLSQ9HDD0 168 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 CCL28Q9NRJ3 127 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 TXNL4BQ9NX01 149 aaKnown RBP6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 MRPL27Q9P0M9 148 aaKnown RBP6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 DAPK2Q9UIK4 370 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
NIF3L1-203ENST00000409129 UPK2O00526 184 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 RBFOX2O43251 390 aaKnown RBP eCLIP6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 MRPS14O60783 128 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 HPRT1P00492 218 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 ELLP55199 621 aaPredicted RBP6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 ARPC4P59998 168 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 NEDD8Q15843 81 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 TIMM50Q3ZCQ8 353 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 UBE2UQ5VVX9 321 aa6.83□□□□□ -1.32
NIF3L1-203ENST00000409129 PLET1Q6UQ28 207 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms