RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 BTNL3Q6UXE8 466 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 TPRX1Q8N7U7 411 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 CLDND2Q8NHS1 167 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 ABHD14AQ9BUJ0 271 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 ACTR3CQ9C0K3 210 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 GAL3ST2Q9H3Q3 398 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 LINC00574Q9H8X3 128 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 DYNLRB1Q9NP97 96 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
SMARCB1-203ENST00000407082 IGHV3OR15-7A0A075B7D8 119 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 LOC102723971A0A1B0GUV8 181 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 CXorf65A6NEN9 183 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 OVOL3O00110 214 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 CYB5BO43169 146 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 SRD5A1P18405 259 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 LOXL3P58215 753 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 HAGHQ16775 308 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ZNF788Q6ZQV5 615 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 IL17RELQ6ZVW7 336 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ZCCHC24Q8N2G6 241 aaKnown RBP10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ZNRF1Q8ND25 227 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 MS4A5Q9H3V2 200 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 RPRMQ9NS64 109 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 ARFGEF3Q5TH69 2177 aa10.58□□□□□ -0.72
SMARCB1-203ENST00000407082 CTXND1A0A1B0GTU2 59 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 UBE2L5PA0A1B0GUS4 154 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 LINC00473A8K010 186 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 C17orf100A8MU93 164 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 FGF7P21781 194 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 PPOXP50336 477 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 RAB13P51153 203 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 OR2B8PP59922 312 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 ICAM4Q14773 271 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 LTC4SQ16873 150 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 AKIRIN2Q53H80 203 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 NCR3LG1Q68D85 454 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 ZNF429Q86V71 674 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 C5orf30Q96GV9 206 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 GAFA1Q96PS6 74 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 FKBP11Q9NYL4 201 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 LINC00312Q9Y6C7 94 aa10.57□□□□□ -0.72
SMARCB1-203ENST00000407082 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 A0A1B0GV50 99 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 COLCA2A8K830 154 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 NDUFA2O43678 99 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 BCL2P10415 239 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 DAOP14920 347 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 NFYBP25208 207 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 PSMB3P49720 205 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 MRPS11P82912 194 aaKnown RBP10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 ARL16Q0P5N6 197 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 C17orf58Q2M2W7 97 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 SMUG1Q53HV7 270 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 LHX4Q969G2 390 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 RARRES2Q99969 163 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 RAB1BQ9H0U4 201 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 HEYLQ9NQ87 328 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 GNG13Q9P2W3 67 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 PUS1Q9Y606 427 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
SMARCB1-203ENST00000407082 H3BQ15 152 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 TGOLN2O43493 480 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 IFNA10P01566 189 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 IFNA4P05014 189 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 MAS1LP35410 378 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 BRWD1-AS2P59051 145 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 CCL20P78556 96 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 DLK1P80370 383 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 RAB31Q13636 194 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 POU2AF1Q16633 256 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 CYB5R2Q6BCY4 276 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 RCC1LQ96I51 464 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 TXNDC17Q9BRA2 123 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 DCTN5Q9BTE1 182 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 IFI27L2Q9H2X8 130 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 CHODLQ9H9P2 273 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
SMARCB1-203ENST00000407082 PPIAL4EA0A075B759 164 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 PMS2P5A8MQ11 134 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 PPIAL4DF5H284 164 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 OR2C1O95371 312 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms