RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CCL25O15444 150 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 WISP2O76076 250 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 GNG10P50151 68 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 C1orf174Q8IYL3 243 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 APH1AQ96BI3 265 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
ATG4B-205ENST00000404914 HYPMO75409 117 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 GCHFRP30047 84 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 ARR3P36575 388 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 AMTP48728 403 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 ZNF83P51522 516 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 FOXF2Q12947 444 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 DOLPP1Q86YN1 238 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
ATG4B-205ENST00000404914 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 A0A1W2PS18 150 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 OPRK1P41145 380 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 OR13A1Q8NGR1 328 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
ATG4B-205ENST00000404914 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 CXorf1O96002 111 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 CGAP01215 116 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 CYB561P49447 251 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 PDLIM3Q53GG5 364 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-205ENST00000404914 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 MED13Q9UHV7 2174 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 IGLC2P0DOY2 106 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 IGLC3P0DOY3 106 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 MAGEA5P43359 124 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 GABRA2P47869 451 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 LCN12Q6JVE5 192 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 NIT1Q86X76 327 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 ZBTB34Q8NCN2 500 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 RNF2Q99496 336 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 SLC45A2Q9UMX9 530 aa12.85□□□□□ -0.35
ATG4B-205ENST00000404914 OR5G3P0C626 314 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 LOXL2Q9Y4K0 774 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 FCGR3BO75015 233 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 EFNB3Q15768 340 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 Q6ZN92 141 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 LOXL4Q96JB6 756 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 HEYLQ9NQ87 328 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-205ENST00000404914 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 TP73-AS1Q9UF72 201 aa12.84□□□□□ -0.35
ATG4B-205ENST00000404914 CDX4O14627 284 aaPredicted RBP12.83□□□□□ -0.35
ATG4B-205ENST00000404914 SUMO1P63165 101 aaKnown RBP12.83□□□□□ -0.35
ATG4B-205ENST00000404914 PRR31Q5SQ13 230 aa12.83□□□□□ -0.35
ATG4B-205ENST00000404914 UTF1Q5T230 341 aa12.83□□□□□ -0.35
ATG4B-205ENST00000404914 UNQ5815/PRO19632Q6UWF5 114 aa12.83□□□□□ -0.35
ATG4B-205ENST00000404914 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.35
ATG4B-205ENST00000404914 FAM122AQ96E09 287 aa12.83□□□□□ -0.35
ATG4B-205ENST00000404914 TNCP24821 2201 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 DLL1O00548 723 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 GFRA3O60609 400 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 ACTL6BO94805 426 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 VDAC2P45880 294 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-205ENST00000404914 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
ATG4B-205ENST00000404914 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 NINJ1Q92982 152 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 TAAR6Q96RI8 345 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 ASCL3Q9NQ33 180 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 SRIP30626 198 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 CENPWQ5EE01 88 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 TXN2Q99757 166 aa12.83□□□□□ -0.36
ATG4B-205ENST00000404914 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-205ENST00000404914 OOEPA6NGQ2 149 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 BMPR1BO00238 502 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-205ENST00000404914 MYOD1P15172 320 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 CRYBB3P26998 211 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-205ENST00000404914 RBX1P62877 108 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 HTD2P86397 168 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 OR1C1Q15619 314 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 PRAMEF5Q5TYX0 476 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 PRAMEF6Q5VXH4 476 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 ZFHX4Q86UP3 3567 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 CER1O95813 267 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 C11orf53Q8IXP5 236 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 Q8IYB0 196 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 GNB1LQ9BYB4 327 aa12.82□□□□□ -0.36
ATG4B-205ENST00000404914 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
ATG4B-205ENST00000404914 SMPD2O60906 423 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 ZNF253O75346 499 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 MPV17P39210 176 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 DCAF12Q5T6F0 453 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms