RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 LOXL3P58215 753 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 RPL39P5Q59GN2 51 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 PRAMEF5Q5TYX0 476 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 VHLLQ6RSH7 139 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 OR5B12Q96R08 314 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 DUSP13Q9UII6 198 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 TET2Q6N021 2002 aaPredicted RBP12.97□□□□□ -0.33
TOM1-203ENST00000404284 TRAV17A0A0B4J275 112 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 PRSS46E5RG02 174 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 M0R1X1 148 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 YPEL1O60688 119 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 VENTXO95231 258 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 VDAC2P45880 294 aaPredicted RBP12.97□□□□□ -0.33
TOM1-203ENST00000404284 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 VKORC1L1Q8N0U8 176 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 RAB1CQ92928 201 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 STARD4Q96DR4 205 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 YPEL2Q96QA6 119 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
TOM1-203ENST00000404284 ZNF134P52741 427 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 SPRNQ5BIV9 151 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 FAM234AQ9H0X4 552 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 SLC25A15Q9Y619 301 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 BDP1A6H8Y1 2624 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 RRHO14718 337 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 MGST3O14880 152 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.33
TOM1-203ENST00000404284 NUPR1O60356 82 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 EDDM3BP56851 147 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 MZT1Q08AG7 82 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 MMDQ15546 238 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.33
TOM1-203ENST00000404284 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
TOM1-203ENST00000404284 FAM216AQ8WUB2 273 aa12.96□□□□□ -0.33
TOM1-203ENST00000404284 ZCCHC14Q8WYQ9 949 aaKnown RBP12.96□□□□□ -0.33
TOM1-203ENST00000404284 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 F2RL2O00254 374 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 IGHV3-13P01766 116 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 IGHV3-7P01780 117 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 CFHR2P36980 270 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 ATP5G3P48201 142 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 GNB1P62873 340 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 RELBQ01201 579 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 C1orf174Q8IYL3 243 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 OR4A16Q8NH70 328 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 PROCRQ9UNN8 238 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 TRAV3A0A0B4J244 114 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 PRSS47A8MTI9 375 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 GFRA3O60609 400 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 NDUFB8O95169 186 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 CRYAAP02489 173 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 BMP5P22003 454 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 KLF3P57682 345 aaPredicted RBP12.95□□□□□ -0.34
TOM1-203ENST00000404284 UTF1Q5T230 341 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 C1orf229Q6ZS94 237 aaPredicted RBP12.95□□□□□ -0.34
TOM1-203ENST00000404284 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 ZNRF1Q8ND25 227 aa12.95□□□□□ -0.34
TOM1-203ENST00000404284 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
TOM1-203ENST00000404284 MPDU1O75352 247 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 CNN1P51911 297 aaKnown RBP12.94□□□□□ -0.34
TOM1-203ENST00000404284 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
TOM1-203ENST00000404284 UBE2G2P60604 165 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 LINC01551Q86U37 167 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 MGST2Q99735 147 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 ALKBH7Q9BT30 221 aaPredicted RBP12.94□□□□□ -0.34
TOM1-203ENST00000404284 NCOR1P1Q9H4R4 102 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
TOM1-203ENST00000404284 PDE6DO43924 150 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 OPRK1P41145 380 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 ACTL10Q5JWF8 245 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 Q6ZVH6 145 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 DDB2Q92466 427 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 MS4A5Q9H3V2 200 aa12.94□□□□□ -0.34
TOM1-203ENST00000404284 PATZ1Q9HBE1 687 aaKnown RBP12.94□□□□□ -0.34
TOM1-203ENST00000404284 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 TYMSP04818 313 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 SRP14P37108 136 aaKnown RBP12.93□□□□□ -0.34
TOM1-203ENST00000404284 ERVK-16P61578 105 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 STPG4Q8N801 248 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 PPP1R35Q8TAP8 253 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 OR2V2Q96R30 315 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 GSX1Q9H4S2 264 aaPredicted RBP12.93□□□□□ -0.34
TOM1-203ENST00000404284 HEYLQ9NQ87 328 aaPredicted RBP12.93□□□□□ -0.34
TOM1-203ENST00000404284 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
TOM1-203ENST00000404284 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms