RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 RLN1P04808 185 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 REG1AP05451 166 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 CRYGCP07315 174 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 FRMD6-AS1P0C7T7 363 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 CTRB1P17538 263 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 ELK1P19419 428 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 OR2B8PP59922 312 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 ERVK-16P61578 105 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 FAM209BQ5JX69 171 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 CTRB2Q6GPI1 263 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 MZT2AQ6P582 158 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 SBSPONQ8IVN8 264 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 COMMD5Q9GZQ3 224 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 NAA50Q9GZZ1 169 aaKnown RBP10.14□□□□□ -0.79
SDF4-203ENST00000403997 SCPEP1Q9HB40 452 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 COMMD9Q9P000 198 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 S4R3C0 116 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 CGB1A6NKQ9 187 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 PPP5D1E7EU14 171 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 GPR31O00270 319 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 GGCTO75223 188 aaKnown RBP10.13□□□□□ -0.79
SDF4-203ENST00000403997 HIST1H1BP16401 226 aaKnown RBP10.13□□□□□ -0.79
SDF4-203ENST00000403997 F2RP25116 425 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 LPAR6P43657 344 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 CTF1Q16619 201 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 GPR107Q5VW38 600 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 LCN12Q6JVE5 192 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 CLEC19AQ6UXS0 136 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 Q8N1Y9 231 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 DGCR14Q96DF8 476 aaKnown RBP10.13□□□□□ -0.79
SDF4-203ENST00000403997 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
SDF4-203ENST00000403997 OR2C1O95371 312 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 HLA-AP01891 365 aaKnown RBP10.12□□□□□ -0.79
SDF4-203ENST00000403997 IGHV4-30-4P0DP06 118 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 ZNF182P17025 639 aaPredicted RBP10.12□□□□□ -0.79
SDF4-203ENST00000403997 S100GP29377 79 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 RCVRNP35243 200 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 LPCAT3Q6P1A2 487 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 FCAMRQ8WWV6 532 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 AP3S1Q92572 193 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 EEF1AKMT3Q96AZ1 226 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 FXYD6Q9H0Q3 95 aa10.12□□□□□ -0.79
SDF4-203ENST00000403997 IGLC7A0M8Q6 106 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 SNAPC5O75971 98 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 GABARAPO95166 117 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 KRASP01116 189 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 G6PCP35575 357 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 ARL3P36405 182 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 ZNF585BQ52M93 769 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 RNASE12Q5GAN4 147 aaKnown RBP10.11□□□□□ -0.79
SDF4-203ENST00000403997 Q8N402 240 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 OR10W1Q8NGF6 305 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
SDF4-203ENST00000403997 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
SDF4-203ENST00000403997 MRPS26Q9BYN8 205 aaKnown RBP10.11□□□□□ -0.79
SDF4-203ENST00000403997 DMRT1Q9Y5R6 373 aa10.11□□□□□ -0.79
SDF4-203ENST00000403997 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 TRBV7-1A0A0A6YYK4 115 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 TEX50A0A1B0GTY4 177 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 IZUMO1RA6ND01 250 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 FGF2P09038 288 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 TRAPPC2P0DI81 140 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 TRAPPC2BP0DI82 140 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
SDF4-203ENST00000403997 KLK9Q2XQG4 91 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 GPR141Q7Z602 305 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 GTSCR1Q86UQ5 136 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 DYNLRB2Q8TF09 96 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 CXorf58Q96LI9 332 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 HINT2Q9BX68 163 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 EXTL2Q9UBQ6 330 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 KLK9Q9UKQ9 250 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 NSG2Q9Y328 171 aa10.1□□□□□ -0.79
SDF4-203ENST00000403997 ZNF320A2RRD8 509 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 MFSD2BA6NFX1 497 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 C2orf70A6NJV1 201 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 M0QYG6 137 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 LGALS9O00182 355 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 CYB5BO43169 146 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 IFNA6P05013 189 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 CLEC3BP05452 202 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 OR13C7P0DN81 318 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 FOLR2P14207 255 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 UCP3P55916 312 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 CD300EQ496F6 205 aaPredicted RBP10.09□□□□□ -0.79
SDF4-203ENST00000403997 THOC7Q6I9Y2 204 aaKnown RBP10.09□□□□□ -0.79
SDF4-203ENST00000403997 SLC25A24Q6NUK1 477 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms