RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-204ENST00000403681 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
HMGA2-204ENST00000403681 ZNF407Q9C0G0 2248 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 CACNA1EQ15878 2313 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 P01737 135 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 ARL3P36405 182 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 C1orf174Q8IYL3 243 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 H1FXQ92522 213 aaKnown RBP11.74□□□□□ -0.53
HMGA2-204ENST00000403681 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGA2-204ENST00000403681 FBXW9Q5XUX1 488 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 UNQ5815/PRO19632Q6UWF5 114 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 BCL2L2Q92843 193 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-204ENST00000403681 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
HMGA2-204ENST00000403681 BPTFQ12830 3046 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 TRGV5A0A0B4J1U4 118 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 TEX50A0A1B0GTY4 177 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 NUDT3O95989 172 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 RPL24P83731 157 aaKnown RBP11.73□□□□□ -0.53
HMGA2-204ENST00000403681 SSPNQ14714 243 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 ADTRPQ96IZ2 230 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
HMGA2-204ENST00000403681 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 C20orf204Q6ZNR8 217 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 GAL3ST2Q9H3Q3 398 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
HMGA2-204ENST00000403681 J3QR89 54 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 IGLV3-1P01715 115 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 FBLN7Q53RD9 439 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 FOXL2NBQ6ZUU3 175 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 OR2M7Q8NG81 312 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 OR51B2Q9Y5P1 312 aa11.73□□□□□ -0.53
HMGA2-204ENST00000403681 CDKN1AP38936 164 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 OR8B3Q8NGG8 313 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 GNB1LQ9BYB4 327 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
HMGA2-204ENST00000403681 TMEM70Q9BUB7 260 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 A0A0G2JMM0 328 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 A0A1W2PPB8 328 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 KIR3DP1A8MWS1 328 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 ETV2O00321 342 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-204ENST00000403681 SPRY3O43610 288 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 MEOX1P50221 254 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 PAXXQ9BUH6 204 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 PRDX2P32119 198 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 UCNP55089 124 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 Q6ZWC4 215 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 C17orf82Q86X59 251 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-204ENST00000403681 OR10X1Q8NGY0 326 aa11.72□□□□□ -0.53
HMGA2-204ENST00000403681 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-204ENST00000403681 WNT9BO14905 357 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 C8orf88P0DMB2 117 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 GAGE1Q13065 139 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 ZNF585BQ52M93 769 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 ZNF497Q6ZNH5 498 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
HMGA2-204ENST00000403681 PPIAL4AQ9Y536 164 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 COL8A1P27658 744 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 CSN1S1P47710 185 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 KRTCAP3Q53RY4 240 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
HMGA2-204ENST00000403681 ZDBF2Q9HCK1 2354 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 A8MWL6 223 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 GPX1P07203 203 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 FOXA3P55318 350 aaPredicted RBP11.71□□□□□ -0.54
HMGA2-204ENST00000403681 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 PET117Q6UWS5 81 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 CEP250Q9BV73 2442 aa11.71□□□□□ -0.54
HMGA2-204ENST00000403681 MIR17HGQ75NE6 70 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 LINC00470Q9BZP3 86 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 IGFBP2P18065 325 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 FCER1GP30273 86 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 UQCRFS1P47985 274 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 NRN1LQ496H8 165 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 IMMP1LQ96LU5 166 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 GVINP1Q7Z2Y8 2422 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 A6NDN8 102 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 NKX6-3A6NJ46 265 aa11.7□□□□□ -0.54
HMGA2-204ENST00000403681 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms