RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 RAB39BQ96DA2 213 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 NIPSNAP3BQ9BS92 247 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 ROS1P08922 2347 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 ZNF727A8MUV8 499 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 B9A039 149 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 RRHO14718 337 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 NDUFB3O43676 98 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 TAGLN2P37802 199 aaKnown RBP12.87□□□□□ -0.35
CDC42-203ENST00000400259 SNRPEP62304 92 aaKnown RBP12.87□□□□□ -0.35
CDC42-203ENST00000400259 LRRC10Q5BKY1 277 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 SLC16A13Q7RTY0 426 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 ZNF596Q8TC21 504 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 TVP23CQ96ET8 276 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
CDC42-203ENST00000400259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
CDC42-203ENST00000400259 KLRB1Q12918 225 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 RBMS3Q6XE24 437 aaKnown RBP12.87□□□□□ -0.35
CDC42-203ENST00000400259 YPEL4Q96NS1 127 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 ZNF257Q9Y2Q1 563 aa12.87□□□□□ -0.35
CDC42-203ENST00000400259 RAB11AP62491 216 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 ACOT6Q3I5F7 207 aaPredicted RBP12.86□□□□□ -0.35
CDC42-203ENST00000400259 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 FAM71F2Q6NXP2 309 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 SLC25A22Q9H936 323 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 CTSZQ9UBR2 303 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 SEC14L6B5MCN3 397 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 CCL3L1P16619 93 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 CHRNB4P30926 498 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
CDC42-203ENST00000400259 B4DEV8 164 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 UPK2O00526 184 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 CYB5BO43169 146 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 TMEM249Q2WGJ8 235 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 TREML4Q6UXN2 200 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 TMEM68Q96MH6 324 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 PKDREJQ9NTG1 2253 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
CDC42-203ENST00000400259 OPRK1P41145 380 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 DLX6P56179 175 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
CDC42-203ENST00000400259 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
CDC42-203ENST00000400259 RAB1CQ92928 201 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 MALSU1Q96EH3 234 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 BET1LQ9NYM9 111 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
CDC42-203ENST00000400259 A0A087X0M5 115 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 A0A1B0GX30 115 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 DVL1O14640 695 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 FSTL3O95633 263 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 RAB5AP20339 215 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 AGAP20933 346 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
CDC42-203ENST00000400259 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
CDC42-203ENST00000400259 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 ADGRG4Q8IZF6 3080 aa12.84□□□□□ -0.35
CDC42-203ENST00000400259 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 FNDC10F2Z333 226 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 OR2C1O95371 312 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 NPY1RP25929 384 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 CD81P60033 236 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 RAB5BP61020 215 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 PRCDQ00LT1 54 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 TMEM155Q4W5P6 130 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.35
CDC42-203ENST00000400259 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.35
CDC42-203ENST00000400259 ENY2Q9NPA8 101 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 SIRT7Q9NRC8 400 aa12.83□□□□□ -0.35
CDC42-203ENST00000400259 CXorf65A6NEN9 183 aa12.83□□□□□ -0.36
CDC42-203ENST00000400259 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
CDC42-203ENST00000400259 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
CDC42-203ENST00000400259 H0YJW9 148 aa12.83□□□□□ -0.36
CDC42-203ENST00000400259 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
CDC42-203ENST00000400259 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.36
CDC42-203ENST00000400259 FAM90A27PA6NNH2 459 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 CCL21O00585 134 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 UBE2CO00762 179 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 KBTBD11O94819 623 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 PLAUP00749 431 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 APOA2P02652 100 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
CDC42-203ENST00000400259 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
CDC42-203ENST00000400259 PSMB3P49720 205 aa12.82□□□□□ -0.36
CDC42-203ENST00000400259 ZNF137PP52743 207 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms