RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CBLN1P23435 193 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 LIMS1P48059 325 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 C11orf91Q3C1V1 193 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 PKIAP61925 76 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 OR4X2Q8NGF9 303 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 MRPL20Q9BYC9 149 aaKnown RBP11.65□□□□□ -0.54
VAPA-202ENST00000400000 COL4A1P02462 1669 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
VAPA-202ENST00000400000 HOXC8P31273 242 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 ASPHD2Q6ICH7 369 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 OR5AN1Q8NGI8 311 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 CABIN1Q9Y6J0 2220 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 GNG5P63218 68 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 OR1P1Q8NH06 330 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 NPFFR1Q9GZQ6 430 aa11.65□□□□□ -0.54
VAPA-202ENST00000400000 IGHV1-2P23083 117 aa11.65□□□□□ -0.55
VAPA-202ENST00000400000 SRSF7Q16629 238 aaKnown RBP eCLIP11.65□□□□□ -0.55
VAPA-202ENST00000400000 CYP2G1PQ6ZSU1 146 aa11.65□□□□□ -0.55
VAPA-202ENST00000400000 MEF2BQ02080 365 aaPredicted RBP11.64□□□□□ -0.55
VAPA-202ENST00000400000 COTL1Q14019 142 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 OR5P3Q8WZ94 311 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 RBM38Q9H0Z9 239 aaKnown RBP11.64□□□□□ -0.55
VAPA-202ENST00000400000 G6PC2Q9NQR9 355 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TRBV5-3A0A0A0MS03 114 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 IGKV1D-42A0A075B6H8 117 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 IRF3Q14653 427 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 ACP7Q6ZNF0 438 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 OR10S1Q8NGN2 331 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 MSGN1A6NI15 193 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 SEMA5BQ9P283 1151 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
VAPA-202ENST00000400000 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
VAPA-202ENST00000400000 TRAV30A0A087WSZ9 112 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 Q5BKY6 102 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 LDLRAD2Q5SZI1 272 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 SCO2A0A1W2PP80 73 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 TGFBR3LH3BV60 316 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 TYMSP04818 313 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 TMEM136Q6ZRR5 245 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 AQP3Q92482 292 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 NDUFA2O43678 99 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 AGAP20933 346 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 EVI2AP22794 236 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 C10orf128Q5T292 105 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 DNM1P46Q6ZS02 220 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
VAPA-202ENST00000400000 CD7P09564 240 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 CEACAM1P13688 526 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 ZP1P60852 638 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 SFRP2Q96HF1 295 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 SPSB2Q99619 263 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 MESP1Q9BRJ9 268 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 LAMB2P55268 1798 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 APOMO95445 188 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
VAPA-202ENST00000400000 GNLYP22749 145 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 RND3P61587 244 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 SERF2P84101 59 aa11.63□□□□□ -0.55
VAPA-202ENST00000400000 C14orf144Q96I85 54 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 SELENOTP62341 195 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 NRN1LQ496H8 165 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 C8orf82Q6P1X6 216 aaPredicted RBP11.62□□□□□ -0.55
VAPA-202ENST00000400000 Q6ZT83 130 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 ZNF729A6NN14 1252 aaPredicted RBP11.62□□□□□ -0.55
VAPA-202ENST00000400000 PEX7O00628 323 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
VAPA-202ENST00000400000 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 TMEM54Q969K7 222 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 CBLN4Q9NTU7 201 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 EFEMP2O95967 443 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 ASIPP42127 132 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 NRIP2Q9BQI9 281 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 GCHFRP30047 84 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
VAPA-202ENST00000400000 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 PIN1P1O15428 100 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 SLC25A38Q96DW6 304 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 ZNF703Q9H7S9 590 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms