RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CRYGCP07315 174 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 CSN3P07498 182 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 DEFA4P12838 97 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 AREGP15514 252 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 HIST1H1BP16401 226 aaKnown RBP10.21□□□□□ -0.77
VCX3A-202ENST00000398729 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 SGPP2Q8IWX5 399 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 CMTM1Q8IZ96 169 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 OR6F1Q8NGZ6 308 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 COMMD5Q9GZQ3 224 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 COMMD9Q9P000 198 aa10.21□□□□□ -0.77
VCX3A-202ENST00000398729 UPK2O00526 184 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 S1PR2O95136 353 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 RLN1P04808 185 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 MYOD1P15172 320 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 CTRB1P17538 263 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 RORCP51449 518 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 OR2B8PP59922 312 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 ERVK-16P61578 105 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 CTRB2Q6GPI1 263 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 C19orf35Q6ZS72 473 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 Q8N1Y9 231 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 Q8N402 240 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 MUC7Q8TAX7 377 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 GPX8Q8TED1 209 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 FANCD2OSQ96PS1 177 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 SCPEP1Q9HB40 452 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 TMEM140Q9NV12 185 aa10.2□□□□□ -0.78
VCX3A-202ENST00000398729 PPP5D1E7EU14 171 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 GGCTO75223 188 aaKnown RBP10.19□□□□□ -0.78
VCX3A-202ENST00000398729 PGLYRP1O75594 196 aaPredicted RBP10.19□□□□□ -0.78
VCX3A-202ENST00000398729 NDUFB8O95169 186 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 REG1AP05451 166 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 FGF2P09038 288 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 F2RP25116 425 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 HLA-DMAP28067 261 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 HRH1P35367 487 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 TSPAN5P62079 268 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 MZT2AQ6P582 158 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 SNX29P2Q8IUI4 249 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 LYSMD2Q8IV50 215 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 OR2K2Q8NGT1 345 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 EEF1AKMT3Q96AZ1 226 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 RCHY1Q96PM5 261 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
VCX3A-202ENST00000398729 ZMAT4Q9H898 229 aa10.19□□□□□ -0.78
VCX3A-202ENST00000398729 PLECQ15149 4684 aaKnown RBP10.19□□□□□ -0.78
VCX3A-202ENST00000398729 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 TRAV3A0A0B4J244 114 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 CGB1A6NKQ9 187 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 A8MZ25 164 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 GPR31O00270 319 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 HPGDSO60760 199 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 OR2C1O95371 312 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 IGHV3-23P01764 117 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 ELK1P19419 428 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 S100GP29377 79 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 ARL3P36405 182 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 KLK9Q2XQG4 91 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 THOC7Q6I9Y2 204 aaKnown RBP10.18□□□□□ -0.78
VCX3A-202ENST00000398729 LPCAT3Q6P1A2 487 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 CLEC19AQ6UXS0 136 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 DYNLRB2Q8TF09 96 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 DGCR14Q96DF8 476 aaKnown RBP10.18□□□□□ -0.78
VCX3A-202ENST00000398729 CXorf58Q96LI9 332 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 QTRT1Q9BXR0 403 aaKnown RBP10.18□□□□□ -0.78
VCX3A-202ENST00000398729 FXYD6Q9H0Q3 95 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 KLK9Q9UKQ9 250 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
VCX3A-202ENST00000398729 TRBV7-1A0A0A6YYK4 115 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 IGLC7A0M8Q6 106 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 MARCH11A6NNE9 402 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 LGALS9O00182 355 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 CYB5BO43169 146 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 GABARAPO95166 117 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 HLA-AP01891 365 aaKnown RBP10.17□□□□□ -0.78
VCX3A-202ENST00000398729 RPA2P15927 270 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 RCVRNP35243 200 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 LPAR6P43657 344 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 MECP2P51608 486 aaKnown RBP10.17□□□□□ -0.78
VCX3A-202ENST00000398729 HSD17B13Q7Z5P4 300 aaPredicted RBP10.17□□□□□ -0.78
VCX3A-202ENST00000398729 GPHB5Q86YW7 130 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 FCAMRQ8WWV6 532 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 AP3S1Q92572 193 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 C19orf73Q9NVV2 129 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 THYN1Q9P016 225 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 S4R3C0 116 aa10.17□□□□□ -0.78
VCX3A-202ENST00000398729 LCE6AA0A183 80 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 IZUMO1RA6ND01 250 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 C2orf70A6NJV1 201 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 FAM25AB3EWG3 89 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 FAM25CB3EWG5 89 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 FAM25GB3EWG6 89 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 SNAPC5O75971 98 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 KRASP01116 189 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 TRAPPC2P0DI81 140 aa10.16□□□□□ -0.78
VCX3A-202ENST00000398729 TRAPPC2BP0DI82 140 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms