RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 RPP25LQ8N5L8 163 aaKnown RBP20.97■□□□□ 0.95
SHARPIN-202ENST00000398712 RXFP4Q8TDU9 374 aa20.97■□□□□ 0.95
SHARPIN-202ENST00000398712 TNFRSF14Q92956 283 aa20.97■□□□□ 0.95
SHARPIN-202ENST00000398712 PLEKHA3Q9HB20 300 aa20.97■□□□□ 0.95
SHARPIN-202ENST00000398712 MIOXQ9UGB7 285 aa20.97■□□□□ 0.95
SHARPIN-202ENST00000398712 REG1BP48304 166 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 AVPI1Q5T686 147 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 C11orf42Q8N5U0 333 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR8B3Q8NGG8 313 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR10G4Q8NGN3 311 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR10G9Q8NGN4 311 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR10G7Q8NGN6 311 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR4C13Q8NGP0 309 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 NEU4Q8WWR8 484 aaPredicted RBP20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 LHX4Q969G2 390 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 TIMD4Q96H15 378 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 OR8B2Q96RD0 313 aa20.96■□□□□ 0.95
SHARPIN-202ENST00000398712 CTXND1A0A1B0GTU2 59 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 SMCO3A2RU48 225 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 IFNA1P01562 189 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 IGKV1D-33P01593 117 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 IGKV1-33P01594 117 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 RAB13P51153 203 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 C4orf17Q53FE4 359 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 TGIF2LXQ8IUE1 241 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 OR5B3Q8NH48 314 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 TMEM170AQ8WVE7 144 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 HINT2Q9BX68 163 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 ATRXP46100 2492 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 RBP4P02753 201 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 BCL2P10415 239 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 FGF8P55075 233 aaPredicted RBP20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 PMS2P11Q13670 270 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 ACOT6Q3I5F7 207 aaPredicted RBP20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 RAB1CQ92928 201 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 NEIL1Q96FI4 390 aaPredicted RBP20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 ACTR3CQ9C0K3 210 aaPredicted RBP20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 WASHC3Q9Y3C0 194 aa20.95■□□□□ 0.94
SHARPIN-202ENST00000398712 M0R036 132 aa20.94■□□□□ 0.94
SHARPIN-202ENST00000398712 AWAT1Q58HT5 328 aa20.94■□□□□ 0.94
SHARPIN-202ENST00000398712 OR4A5Q8NH83 315 aa20.94■□□□□ 0.94
SHARPIN-202ENST00000398712 VSTM2AQ8TAG5 236 aa20.94■□□□□ 0.94
SHARPIN-202ENST00000398712 CACNA1BQ00975 2339 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 MC5RP33032 325 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 PRRX1P54821 245 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 ATP5IP56385 69 aaPredicted RBP20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 TREML4Q6UXN2 200 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 C8orf46Q8TAG6 207 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 SMCO4Q9NRQ5 59 aa20.93■□□□□ 0.94
SHARPIN-202ENST00000398712 TEX50A0A1B0GTY4 177 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 LOC105371267A0A1B0GV96 52 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 ZFP92A6NM28 416 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 CA2P00918 260 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 MYOD1P15172 320 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 AGAP20933 346 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 AKIRIN2Q53H80 203 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 RPS10P5Q9NQ39 176 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 KALRNO60229 2985 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 PPIAL4CA0A0B4J2A2 164 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 CYB5BO43169 146 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 SOD3P08294 240 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 PPIAL4GP0DN37 164 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 USF1P22415 310 aaPredicted RBP20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 DIAPH2-AS1Q14236 149 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 RHEBQ15382 184 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 DTX2Q86UW9 622 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 SLC25A22Q9H936 323 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 NPVFQ9HCQ7 196 aa20.92■□□□□ 0.94
SHARPIN-202ENST00000398712 IGHV2-26A0A0B4J1V2 119 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 hCG_1809904A0A1W2PP81 198 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 A0A1W2PPE2 198 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 A0A1W2PR64 198 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 A0A1W2PRV1 198 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 SNRNP70P08621 437 aaKnown RBP20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 OPRK1P41145 380 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 WDR25Q64LD2 544 aaPredicted RBP20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 RBMS3Q6XE24 437 aaKnown RBP20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 Q8N7P7 452 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 CYB561D1Q8N8Q1 229 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 KCNIP2Q9NS61 270 aa20.91■□□□□ 0.94
SHARPIN-202ENST00000398712 C7orf77A4D0Y5 90 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 RPL8P62917 257 aaKnown RBP20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 FAM122CQ6P4D5 195 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 P2RX4Q99571 388 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 COMMD5Q9GZQ3 224 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 VAX2Q9UIW0 290 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 FNDC10F2Z333 226 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 TMEM167AQ8TBQ9 72 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 ITLN2Q8WWU7 325 aaPredicted RBP20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 CLEC7AQ9BXN2 247 aa20.9■□□□□ 0.94
SHARPIN-202ENST00000398712 KMT2BQ9UMN6 2715 aaPredicted RBP20.89■□□□□ 0.93
SHARPIN-202ENST00000398712 CEBPGP53567 150 aa20.89■□□□□ 0.93
SHARPIN-202ENST00000398712 HLA-DRB5Q30154 266 aa20.89■□□□□ 0.93
SHARPIN-202ENST00000398712 OR1L8Q8NGR8 309 aa20.89■□□□□ 0.93
SHARPIN-202ENST00000398712 PUS1Q9Y606 427 aaKnown RBP eCLIP20.89■□□□□ 0.93
SHARPIN-202ENST00000398712 COL6A6A6NMZ7 2263 aa20.88■□□□□ 0.93
SHARPIN-202ENST00000398712 FBP1P09467 338 aa20.88■□□□□ 0.93
SHARPIN-202ENST00000398712 TAGLN2P37802 199 aaKnown RBP20.88■□□□□ 0.93
SHARPIN-202ENST00000398712 BEND2Q8NDZ0 799 aa20.88■□□□□ 0.93
SHARPIN-202ENST00000398712 RAB24Q969Q5 203 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms