RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RSL24D1Q9UHA3 163 aaKnown RBP0.97□□□□□ -2.25
CMC1-202ENST00000396610 TIMM22Q9Y584 194 aa0.97□□□□□ -2.25
CMC1-202ENST00000396610 MEIS3P1A6NDR6 274 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 OR51F1A6NGY5 319 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 LST1O00453 97 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 KRT75O95678 551 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 COX5BP10606 129 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 CCL1P22362 96 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 OR4D2P58180 307 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 EMX1Q04741 257 aaPredicted RBP0.96□□□□□ -2.26
CMC1-202ENST00000396610 ELOBQ15370 118 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 FAM173BQ6P4H8 233 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 DYNAPQ8N1N2 210 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 OR1M1Q8NGA1 313 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 PIGXQ8TBF5 258 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 MBD3L1Q8WWY6 194 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 FGFR1OP2Q9NVK5 253 aa0.96□□□□□ -2.26
CMC1-202ENST00000396610 INTS1Q8N201 2190 aaKnown RBP0.96□□□□□ -2.26
CMC1-202ENST00000396610 DICER1Q9UPY3 1922 aaKnown RBP0.95□□□□□ -2.26
CMC1-202ENST00000396610 IGKV3-7A0A075B6H7 116 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 TRAPPC13A5PLN9 417 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 MRPS14O60783 128 aaKnown RBP0.95□□□□□ -2.26
CMC1-202ENST00000396610 OCM2P0CE71 109 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 SULT1A3P0DMM9 295 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 SULT1A4P0DMN0 295 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 G6PCP35575 357 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 REG1BP48304 166 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 MAP3K7CLP57077 242 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 CDK5R1Q15078 307 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 CLVS2Q5SYC1 327 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 C1orf195Q5TG92 126 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 LRRN1Q6UXK5 716 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 TMEM156Q8N614 296 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 C9orf163Q8N9P6 203 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 OR5B17Q8NGF7 314 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 OR8B3Q8NGG8 313 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 ANKRD7Q92527 254 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 DIRAS2Q96HU8 199 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 ADAT1Q9BUB4 502 aaKnown RBP0.95□□□□□ -2.26
CMC1-202ENST00000396610 HDHD2Q9H0R4 259 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 MED9Q9NWA0 146 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 FLT4P35916 1363 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 ABCC11Q96J66 1382 aa0.95□□□□□ -2.26
CMC1-202ENST00000396610 EVPLLA8MZ36 301 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 H0Y980 276 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 M0QZ92 97 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 CXCR6O00574 342 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 SLC22A1O15245 554 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 SLC16A4O15374 487 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 DEXIO95424 95 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 MSMBP08118 114 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 IL9P15248 144 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 KCNE1P15382 129 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 HLA-DMBP28068 263 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 CCR7P32248 378 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 MAP2K4P45985 399 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 EVX1P49640 407 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 FAM27BQ5VT28 67 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 ZNF550Q7Z398 422 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 DCXRQ7Z4W1 244 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 RAB8BQ92930 207 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 ROPN1LQ96C74 230 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 OR8D2Q9GZM6 311 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 FAM96AQ9H5X1 160 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 PAQR5Q9NXK6 330 aaPredicted RBP0.94□□□□□ -2.26
CMC1-202ENST00000396610 C3orf18Q9UK00 162 aa0.94□□□□□ -2.26
CMC1-202ENST00000396610 TRBV10-2A0A0K0K1G8 114 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 IBA57-AS1B1ANH7 110 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 TRAPPC2LH3BP13 241 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 CETN3O15182 167 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 NOS1APO75052 506 aaPredicted RBP0.93□□□□□ -2.26
CMC1-202ENST00000396610 TPM3P06753 285 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 SRP19P09132 144 aaKnown RBP0.93□□□□□ -2.26
CMC1-202ENST00000396610 FAM228BP0C875 321 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 UBBP0CG47 229 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 RPS12P25398 132 aaKnown RBP0.93□□□□□ -2.26
CMC1-202ENST00000396610 CAV1Q03135 178 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 DMTNQ08495 405 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 SURF2Q15527 256 aaPredicted RBP0.93□□□□□ -2.26
CMC1-202ENST00000396610 OGFRL1Q5TC84 451 aaPredicted RBP0.93□□□□□ -2.26
CMC1-202ENST00000396610 GID4Q8IVV7 300 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 C15orf53Q8NAA6 179 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 USE1Q9NZ43 259 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 FUT9Q9Y231 359 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 ATP6V1DQ9Y5K8 247 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 PTPRBP23467 1997 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 BRWD1Q9NSI6 2320 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 ARFGEF3Q5TH69 2177 aa0.93□□□□□ -2.26
CMC1-202ENST00000396610 SCAF11Q99590 1463 aaKnown RBP0.92□□□□□ -2.26
CMC1-202ENST00000396610 REREQ9P2R6 1566 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 GGT3PA6NGU5 568 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 LRRN3E7EW58 273 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 SDCBPO00560 298 aaPredicted RBP0.92□□□□□ -2.26
CMC1-202ENST00000396610 MYL12AP19105 171 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 MAGEA2P43356 314 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 FXYD2P54710 66 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 TPM4P67936 248 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 RPL18Q07020 188 aaKnown RBP0.92□□□□□ -2.26
CMC1-202ENST00000396610 NDUFA5Q16718 116 aa0.92□□□□□ -2.26
CMC1-202ENST00000396610 DHFR2Q86XF0 187 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms