RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 PNLIPP16233 465 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 SCN5AQ14524 2016 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 GCHFRP30047 84 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
TRPS1-203ENST00000395715 GATAD1Q8WUU5 269 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
TRPS1-203ENST00000395715 VSTM2LQ96N03 204 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 HS3ST3B1Q9Y662 390 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 A0A0A6YYD5 115 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 UBE2CO00762 179 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 OR2H2O95918 312 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 INAFM2P0DMQ5 153 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
TRPS1-203ENST00000395715 ORMDL2Q53FV1 153 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 FBXW9Q5XUX1 488 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 EVI2AP22794 236 aa6.87□□□□□ -1.31
TRPS1-203ENST00000395715 TMEM229AB2RXF0 380 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 TMEM52BQ4KMG9 183 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
TRPS1-203ENST00000395715 TAF1P21675 1872 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 AGFG2O95081 481 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 SRFP11831 508 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 UNQ5815/PRO19632Q6UWF5 114 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 OR5P3Q8WZ94 311 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 PRRC2BQ5JSZ5 2229 aaKnown RBP6.86□□□□□ -1.31
TRPS1-203ENST00000395715 UNC119Q13432 240 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 EEF1AKMT3Q96AZ1 226 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 ZIC3O60481 467 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 GAGE7O76087 117 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 LSM6P62312 80 aaKnown RBP6.86□□□□□ -1.31
TRPS1-203ENST00000395715 CD300LDQ6UXZ3 194 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 OR11H4Q8NGC9 324 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 KIAA1217Q5T5P2 1943 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 A0A1W2PQF6 199 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 TNFSF13O75888 250 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 EGR1P18146 543 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 EFNB1P98172 346 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 PRB3Q04118 309 aaPredicted RBP6.86□□□□□ -1.31
TRPS1-203ENST00000395715 PATE1Q8WXA2 126 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 A0A1W2PPI3 338 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 PAX1P15863 534 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 FGFRL1Q8N441 504 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 TMEM170AQ8WVE7 144 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 CD69Q07108 199 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 ZNF79Q15937 498 aa6.86□□□□□ -1.31
TRPS1-203ENST00000395715 INO80CQ6PI98 192 aaPredicted RBP6.86□□□□□ -1.31
TRPS1-203ENST00000395715 GDF15Q99988 308 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CHST5Q9GZS9 411 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 N4BP2Q86UW6 1770 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CCL1P22362 96 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 POLR2AP24928 1970 aaKnown RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CD300EQ496F6 205 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 DRAM1Q8N682 238 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 SCN11AQ9UI33 1791 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 A0A087X0K7 114 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 SELLP14151 372 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 IGKV1D-42A0A075B6H8 117 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CNRIP1Q96F85 164 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CHAC1Q9BUX1 264 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CLEC7AQ9BXN2 247 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 A8MXK9 166 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 C2CD4DB7Z1M9 353 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 RICTORQ6R327 1708 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 C4BP0C0L5 1744 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 IGHV3-72A0A0B4J1Y9 119 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 ZG16O60844 167 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 SP9P0CG40 484 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CIARTQ8N365 385 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-203ENST00000395715 PDLIM7Q9NR12 457 aa6.85□□□□□ -1.31
TRPS1-203ENST00000395715 CGAP01215 116 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 APOBEC4Q8WW27 367 aaKnown RBP6.84□□□□□ -1.31
TRPS1-203ENST00000395715 ITLN2Q8WWU7 325 aaPredicted RBP6.84□□□□□ -1.31
TRPS1-203ENST00000395715 FCN3O75636 299 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 PF4P02776 101 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 COX6B1P14854 86 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 ZNRF1Q8ND25 227 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 LINC01587Q99440 93 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 SMPXQ9UHP9 88 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 NDUFS5O43920 106 aa6.84□□□□□ -1.31
TRPS1-203ENST00000395715 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.31
TRPS1-203ENST00000395715 TRAV17A0A0B4J275 112 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms