RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PRR32B1ATL7 298 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 IFNL4K9M1U5 179 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 ZNF414Q96IQ9 312 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 CCL13Q99616 98 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 IGKV3D-11A0A0A0MRZ8 115 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 PCSK4Q6UW60 755 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 NEU1Q99519 415 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 SPSB2Q99619 263 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 PARP14Q460N5 1801 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 IZUMO1RA6ND01 250 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 SP9P0CG40 484 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 ATP5G3P48201 142 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 PAQR4Q8N4S7 273 aaPredicted RBP14.59□□□□□ -0.07
SIN3A-203ENST00000394949 FAM131CQ96AQ9 280 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 TRAV1-1A0A0B4J248 108 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 A0A1B0GW15 77 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 SNRPCP09234 159 aaKnown RBP14.59□□□□□ -0.07
SIN3A-203ENST00000394949 TFF3Q07654 80 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
SIN3A-203ENST00000394949 SBF2Q86WG5 1849 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 CTSSP25774 331 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 C2orf83Q53S99 150 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 OR4D5Q8NGN0 318 aa14.59□□□□□ -0.07
SIN3A-203ENST00000394949 NDUFA2O43678 99 aa14.58□□□□□ -0.07
SIN3A-203ENST00000394949 APELAP0DMC3 54 aa14.58□□□□□ -0.07
SIN3A-203ENST00000394949 PCOLCEQ15113 449 aa14.58□□□□□ -0.07
SIN3A-203ENST00000394949 OR4C13Q8NGP0 309 aa14.58□□□□□ -0.07
SIN3A-203ENST00000394949 GTF3AQ92664 365 aaKnown RBP14.58□□□□□ -0.07
SIN3A-203ENST00000394949 NEUROG1Q92886 237 aa14.58□□□□□ -0.07
SIN3A-203ENST00000394949 COX6A1P12074 109 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 LHFPL1Q86WI0 220 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 SPOCK3Q9BQ16 436 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 HCP5Q6MZN7 132 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 CGAP01215 116 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 ARL6IP6Q8N6S5 226 aa14.58□□□□□ -0.08
SIN3A-203ENST00000394949 SHISA5Q8N114 240 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 C17orf51A8MQB3 221 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 CCL20P78556 96 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 SLC25A53Q5H9E4 307 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.57□□□□□ -0.08
SIN3A-203ENST00000394949 KLF14Q8TD94 323 aaPredicted RBP14.57□□□□□ -0.08
SIN3A-203ENST00000394949 WFDC1Q9HC57 220 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 F11RQ9Y624 299 aaKnown RBP14.57□□□□□ -0.08
SIN3A-203ENST00000394949 CACNA1GO43497 2377 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 AMBPP02760 352 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 IL4P05112 153 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 TTC32Q5I0X7 151 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 SAPCD1Q5SSQ6 148 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 ITLN1Q8WWA0 313 aa14.57□□□□□ -0.08
SIN3A-203ENST00000394949 ANOS1P23352 680 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 FOXA3P55318 350 aaPredicted RBP14.56□□□□□ -0.08
SIN3A-203ENST00000394949 NUTF2P61970 127 aaKnown RBP14.56□□□□□ -0.08
SIN3A-203ENST00000394949 MRPL13Q9BYD1 178 aaKnown RBP14.56□□□□□ -0.08
SIN3A-203ENST00000394949 MRPL52Q86TS9 123 aaKnown RBP14.56□□□□□ -0.08
SIN3A-203ENST00000394949 NPIPB3Q92617 1050 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 C1QTNF5Q9BXJ0 243 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
SIN3A-203ENST00000394949 C12orf77C9JDV5 145 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 PEX7O00628 323 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TNFSF13O75888 250 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 ADMP35318 185 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TMPRSS3P57727 454 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 SMAGPQ0VAQ4 97 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 Q6AWC8 147 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TMEM186Q96B77 213 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 NRXN2Q9P2S2 1712 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TRAV9-2A0A087WT02 112 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TGFBR3LH3BV60 316 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 ID1P41134 155 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 IFI27L2Q9H2X8 130 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 TMEM74BQ9NUR3 256 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
SIN3A-203ENST00000394949 OR10J3Q5JRS4 329 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 C2orf88Q9BSF0 95 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 OSTCQ9NRP0 149 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 OR11H12B2RN74 326 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 C1QTNF9BB2RNN3 333 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 CXCL1P09341 107 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 RAB9AP51151 201 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 TTC9CQ8N5M4 171 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 OR11H1Q8NG94 326 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 OR11H2Q8NH07 326 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 SPTBN1Q01082 2364 aaKnown RBP14.55□□□□□ -0.08
SIN3A-203ENST00000394949 C7orf71A4D174 169 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 LDLRAD4O15165 306 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 RBFOX2O43251 390 aaKnown RBP eCLIP14.55□□□□□ -0.08
SIN3A-203ENST00000394949 MFAP4P55083 255 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 CLEC2AQ6UVW9 174 aa14.55□□□□□ -0.08
SIN3A-203ENST00000394949 RALGAPA2Q2PPJ7 1873 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 SLC25A17O43808 307 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 ZNF324O75467 553 aaPredicted RBP14.54□□□□□ -0.08
SIN3A-203ENST00000394949 CEACAM1P13688 526 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 CDCP2Q5VXM1 449 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 GOLT1AQ6ZVE7 132 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 GNB1LQ9BYB4 327 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 TDRD6O60522 2096 aaKnown RBP14.54□□□□□ -0.08
SIN3A-203ENST00000394949 CASP8AP2Q9UKL3 1982 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 IGKV1-9A0A0C4DH69 117 aa14.54□□□□□ -0.08
SIN3A-203ENST00000394949 A0A1B0GUT8 65 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms