RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 UBE2CO00762 179 aa15.67■□□□□ 0.1
TRAF4-203ENST00000394925 HRASP01112 189 aa15.67■□□□□ 0.1
TRAF4-203ENST00000394925 GALP22466 123 aa15.67■□□□□ 0.1
TRAF4-203ENST00000394925 EIF4EBP1Q13541 118 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-203ENST00000394925 UFC1Q9Y3C8 167 aa15.67■□□□□ 0.1
TRAF4-203ENST00000394925 TRAV1-2A0A0B4J238 106 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 CGB1A6NKQ9 187 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 HLA-GP17693 338 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 ARL6IP1Q15041 203 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 PLET1Q6UQ28 207 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 STPG3Q8N7X2 389 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 RNF183Q96D59 192 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 SPAG8Q99932 426 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-203ENST00000394925 C5orf66Q9H5L9 145 aa15.66■□□□□ 0.1
TRAF4-203ENST00000394925 ATF4P18848 351 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-203ENST00000394925 RAB3BP20337 219 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 ELLP55199 621 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-203ENST00000394925 SSX1Q16384 188 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 HACD4Q5VWC8 232 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 CNIH2Q6PI25 160 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 ZNF502Q8TBZ5 544 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 PHLDA1Q8WV24 401 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-203ENST00000394925 NUDCD2Q8WVJ2 157 aa15.65■□□□□ 0.1
TRAF4-203ENST00000394925 RPL35AP18077 110 aaKnown RBP15.64■□□□□ 0.09
TRAF4-203ENST00000394925 MYL9P24844 172 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 ZNF66Q6ZN08 573 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 TMEM217Q8N7C4 229 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 DCSTAMPQ9H295 470 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 HRASLSQ9HDD0 168 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 BET1LQ9NYM9 111 aa15.64■□□□□ 0.09
TRAF4-203ENST00000394925 KIR2DL5BA0A0G2JN68 375 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 KIR2DL5BA0A0G2JPC4 375 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 TSPAN4O14817 238 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 TNFSF12O43508 249 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 RPA2P15927 270 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 OR2B8PP59922 312 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 TIMM50Q3ZCQ8 353 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 KIR2DL5AQ8N109 375 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 OR4A5Q8NH83 315 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 KIR2DL5BQ8NHK3 375 aa15.63■□□□□ 0.09
TRAF4-203ENST00000394925 ZNF436Q9C0F3 470 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-203ENST00000394925 HECTD4Q9Y4D8 3996 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 IGLC7A0M8Q6 106 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 SMIM30A4D0T7 59 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 PTBP1P26599 531 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAF4-203ENST00000394925 ODF3L2Q3SX64 289 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 LGALS9CQ6DKI2 356 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 PRSS48Q7RTY5 328 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 TMEM190Q8WZ59 177 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 THYN1Q9P016 225 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 ANXA10Q9UJ72 324 aa15.62■□□□□ 0.09
TRAF4-203ENST00000394925 TRAV3A0A0B4J244 114 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 TMEM235A6NFC5 223 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 TGOLN2O43493 480 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 S1PR2O95136 353 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 LAMTOR1Q6IAA8 161 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 NR2C2APQ86WQ0 139 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 SPAG16Q8N0X2 631 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 SECTM1Q8WVN6 248 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 AIFM2Q9BRQ8 373 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 CCL28Q9NRJ3 127 aa15.61■□□□□ 0.09
TRAF4-203ENST00000394925 OR2T8A6NH00 312 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 FCGR2BP31994 310 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-203ENST00000394925 AQP4P55087 323 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 GNG2P59768 71 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 OR5B3Q8NH48 314 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 GALNT14Q96FL9 552 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 MAP6D1Q9H9H5 199 aa15.6■□□□□ 0.09
TRAF4-203ENST00000394925 SSX5O60225 188 aa15.59■□□□□ 0.09
TRAF4-203ENST00000394925 OR10W1Q8NGF6 305 aa15.59■□□□□ 0.09
TRAF4-203ENST00000394925 COMMD5Q9GZQ3 224 aa15.59■□□□□ 0.09
TRAF4-203ENST00000394925 DAZ1Q9NQZ3 744 aaKnown RBP15.59■□□□□ 0.09
TRAF4-203ENST00000394925 IGHV3OR16-8A0A075B7F1 116 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 TRDV1A0A1B0GX56 115 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 OR4C46A6NHA9 309 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 UPK2O00526 184 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 C22orf42Q6IC83 251 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 ZNF367Q7RTV3 350 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 VN1R17PQ8TDU5 208 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 C20orf24Q9BUV8 137 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 NDUFB11Q9NX14 153 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 VPS13DQ5THJ4 4388 aa15.58■□□□□ 0.08
TRAF4-203ENST00000394925 PCLOQ9Y6V0 5065 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 SULT1C2O00338 296 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 ZNF207O43670 478 aaKnown RBP15.57■□□□□ 0.08
TRAF4-203ENST00000394925 PTHLHP12272 177 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 FCGR2CP31995 323 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 TAS2R31P59538 309 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 TBCEQ15813 527 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-203ENST00000394925 SLC25A24Q6NUK1 477 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 OR13F1Q8NGS4 319 aa15.57■□□□□ 0.08
TRAF4-203ENST00000394925 SRSF8Q9BRL6 282 aaKnown RBP15.57■□□□□ 0.08
TRAF4-203ENST00000394925 IGHV3-21A0A0B4J1V1 117 aa15.56■□□□□ 0.08
TRAF4-203ENST00000394925 CYB5BO43169 146 aa15.56■□□□□ 0.08
TRAF4-203ENST00000394925 RBFOX2O43251 390 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■□□□□ 9.7
TRAF4-203ENST00000394925 CTSDP07339 412 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-203ENST00000394925 NQO2P16083 231 aa15.56■□□□□ 0.08
TRAF4-203ENST00000394925 ARPC4P59998 168 aa15.56■□□□□ 0.08
TRAF4-203ENST00000394925 GDPD1Q8N9F7 314 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms