RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 WFDC1Q9HC57 220 aa16.31■□□□□ 0.2
HDDC3-202ENST00000394272 PRRC2AP48634 2157 aaKnown RBP16.3■□□□□ 0.2
HDDC3-202ENST00000394272 ZNF469Q96JG9 3925 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-202ENST00000394272 LY86O95711 162 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 FGF2P09038 288 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 CNTFRP26992 372 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 SULT1A1P50225 295 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 RPL8P62917 257 aaKnown RBP16.3■□□□□ 0.2
HDDC3-202ENST00000394272 MRGPRG-AS1Q2M3A8 158 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 RPL7L1Q6DKI1 246 aaKnown RBP16.3■□□□□ 0.2
HDDC3-202ENST00000394272 STX12Q86Y82 276 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 TEX45Q8NA69 505 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 Q96MF0 132 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
HDDC3-202ENST00000394272 FKBP11Q9NYL4 201 aa16.3■□□□□ 0.2
HDDC3-202ENST00000394272 CELSR1Q9NYQ6 3014 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 TMEM267Q0VDI3 215 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-202ENST00000394272 PSG5Q15238 335 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 OR5B3Q8NH48 314 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 OR4C12Q96R67 309 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 C7orf69Q9H7B7 122 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 TPSG1Q9NRR2 321 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 CREBBPQ92793 2442 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 PDZD2O15018 2839 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 ITPR2Q14571 2701 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 METTL15P1P0C7V9 234 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 TPT1P13693 172 aaKnown RBP16.29■□□□□ 0.2
HDDC3-202ENST00000394272 MAPK1IP1LQ8NDC0 245 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 OR5C1Q8NGR4 320 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 ZNF430Q9H8G1 570 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-202ENST00000394272 UBQLN2Q9UHD9 624 aa16.29■□□□□ 0.2
HDDC3-202ENST00000394272 PAIP2BQ9ULR5 123 aaKnown RBP16.29■□□□□ 0.2
HDDC3-202ENST00000394272 ZFHX3Q15911 3703 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 TRAV40A0A0B4J280 105 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 IGHV1-69DA0A0B4J2H0 117 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 TEX50A0A1B0GTY4 177 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 JTBO76095 146 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 IGKV1D-33P01593 117 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 IGKV1-33P01594 117 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 IGHV1-69P01742 117 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 DYNLT3P51808 116 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 PRCDQ00LT1 54 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 ALKAL2Q6UX46 152 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 HAPLN4Q86UW8 402 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 THNSL2Q86YJ6 484 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 BAP18Q8IXM2 172 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 STPG2Q8N412 459 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 TMEM217Q8N7C4 229 aa16.28■□□□□ 0.2
HDDC3-202ENST00000394272 ARL16Q0P5N6 197 aa16.27■□□□□ 0.2
HDDC3-202ENST00000394272 EBI3Q14213 229 aa16.27■□□□□ 0.2
HDDC3-202ENST00000394272 UBAC2Q8NBM4 344 aa16.27■□□□□ 0.2
HDDC3-202ENST00000394272 PHYHIPLQ96FC7 376 aa16.27■□□□□ 0.2
HDDC3-202ENST00000394272 SIGLEC9Q9Y336 463 aa16.27■□□□□ 0.2
HDDC3-202ENST00000394272 STRAPQ9Y3F4 350 aaKnown RBP16.27■□□□□ 0.2
HDDC3-202ENST00000394272 ZANQ9Y493 2812 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 MOSP00540 346 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 HOXA1P49639 335 aaPredicted RBP16.27■□□□□ 0.19
HDDC3-202ENST00000394272 FBLN7Q53RD9 439 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 SCARB1Q8WTV0 552 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 EAF1Q96JC9 268 aaPredicted RBP16.27■□□□□ 0.19
HDDC3-202ENST00000394272 HIPK2Q9H2X6 1198 aa16.27■□□□□ 0.19
HDDC3-202ENST00000394272 C15orf62A8K5M9 175 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 OPN1MWP04001 364 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 SNRNP70P08621 437 aaKnown RBP16.26■□□□□ 0.19
HDDC3-202ENST00000394272 OPN1MW2P0DN77 364 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 OPN1MW3P0DN78 364 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 IGHV4-31P0DP07 118 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 CD24P25063 80 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 PJVKQ0ZLH3 352 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 CLINT1Q14677 625 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 TMEM249Q2WGJ8 235 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 RUSC1-AS1Q66K80 236 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 CLCC1Q96S66 551 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 COMMD5Q9GZQ3 224 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 ARV1Q9H2C2 271 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 HEYLQ9NQ87 328 aaPredicted RBP16.26■□□□□ 0.19
HDDC3-202ENST00000394272 NDUFA4L2Q9NRX3 87 aa16.26■□□□□ 0.19
HDDC3-202ENST00000394272 AVPP01185 164 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 IGHV4-38-2P0DP08 117 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 F2RL1P55085 397 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 EIF5AP63241 154 aaKnown RBP16.25■□□□□ 0.19
HDDC3-202ENST00000394272 PRSS8Q16651 343 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 OR1S2Q8NGQ3 325 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 OR1L8Q8NGR8 309 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 OR2T10Q8NGZ9 312 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 METTL1Q9UBP6 276 aaKnown RBP16.25■□□□□ 0.19
HDDC3-202ENST00000394272 CCDC168Q8NDH2 2452 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 IGHV3OR16-10A0A075B7F0 116 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 E7EUB6 86 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 NDUFA3O95167 84 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 MMD2Q8IY49 270 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 Q8N6K4 173 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 NPBQ8NG41 125 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 PLEKHA3Q9HB20 300 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 ITGB1BP2Q9UKP3 347 aa16.25■□□□□ 0.19
HDDC3-202ENST00000394272 ABCA1O95477 2261 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 CSPG4Q6UVK1 2322 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 CGB1A6NKQ9 187 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 RRHO14718 337 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms