RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 HEXA-AS1Q9H8Q6 139 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SHPKQ9UHJ6 478 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PPIAL4AQ9Y536 164 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 C15orf65H3BRN8 121 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 FCN3O75636 299 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 SOD3P08294 240 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 MUC1P15941 1255 aaPredicted RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 S100A11P31949 105 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 ID1P41134 155 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 FGF8P55075 233 aaPredicted RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 SRSF4Q08170 494 aaKnown RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 FGL1Q08830 312 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 EFNB3Q15768 340 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 AVPI1Q5T686 147 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 BOD1L2Q8IYS8 172 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 LINC01356Q8N9X3 169 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 DPF1Q92782 380 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 SDSLQ96GA7 329 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 NARS2Q96I59 477 aaKnown RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 RNF126Q9BV68 326 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 NMES1Q9C002 83 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 FAM234AQ9H0X4 552 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 YAE1D1Q9NRH1 226 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 CALYQ9NYX4 217 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 LAMP3Q9UQV4 416 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 CELSR1Q9NYQ6 3014 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 TRAV38-1A0A0B4J264 116 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 RNF222A6NCQ9 220 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 MSGN1A6NI15 193 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 NKX6-3A6NJ46 265 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 HMSDA8MTL9 139 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 MMP23AO75900 390 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 SERPINE2P07093 398 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 ZNF25P17030 456 aaPredicted RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 F2RP25116 425 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 CYCSP99999 105 aaKnown RBP4.81□□□□□ -1.64
CASC3-202ENST00000394114 TEX36Q5VZQ5 186 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 TCF23Q7RTU1 214 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 OR1S1Q8NH92 325 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 C18orf12Q96KH6 178 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 BIN3Q9NQY0 253 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 ZNRD1Q9P1U0 126 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 TNFSF18Q9UNG2 199 aa4.81□□□□□ -1.64
CASC3-202ENST00000394114 ITPR2Q14571 2701 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TRGV10A0A0A0MS01 117 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 FBLL1A6NHQ2 334 aaKnown RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 SIGLEC5O15389 551 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 RAMP3O60896 148 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 CCL3L1P16619 93 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 GZMHP20718 246 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 S100GP29377 79 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 RPL30P62888 115 aaKnown RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 PRB3Q04118 309 aaPredicted RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 C17orf58Q2M2W7 97 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TEX261Q6UWH6 196 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 ALKAL2Q6UX46 152 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 STHQ8IWL8 128 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 INO80EQ8NBZ0 244 aaPredicted RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 OR10A7Q8NGE5 316 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 OR5D13Q8NGL4 314 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 OR4A16Q8NH70 328 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TMEM204Q9BSN7 226 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TOLLIPQ9H0E2 274 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 MAGT1Q9H0U3 335 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 UBTD1Q9HAC8 227 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 CTSZQ9UBR2 303 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 U3KQ87 197 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 FBN2P35556 2912 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TNCP24821 2201 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 H0Y980 276 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 NDUFS7O75251 213 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 CDS2O95674 445 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 NPSP0C0P6 89 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 UCP1P25874 307 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 COMPP49747 757 aaPredicted RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 AKR1C2P52895 323 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 RND3P61587 244 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 NUTF2P61970 127 aaKnown RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 RPL31P62899 125 aaKnown RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 ZNF816Q0VGE8 651 aaPredicted RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 IL15RAQ13261 267 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
CASC3-202ENST00000394114 RPL39P5Q59GN2 51 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 TCTEX1D2Q8WW35 142 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 ASB13Q8WXK3 278 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 RAB9BQ9NP90 201 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 SIRT7Q9NRC8 400 aa4.8□□□□□ -1.64
CASC3-202ENST00000394114 HELTA6NFD8 242 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 LINC00473A8K010 186 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 J3QR06 171 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 DVL1O14640 695 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 RP2O75695 350 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 C1QL1O75973 258 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 IGKV1-39P01597 117 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 IGKV1D-39P04432 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms