RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 UBE2CO00762 179 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 SLC22A5O76082 557 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 CLEC3BP05452 202 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 TALDO1P37837 337 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 PSMD7P51665 324 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
CHMP3-202ENST00000393773 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
CHMP3-202ENST00000393773 UFC1Q9Y3C8 167 aa11.36□□□□□ -0.59
CHMP3-202ENST00000393773 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 ERICH4A6NGS2 130 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 TSPAN4O14817 238 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 HLA-GP17693 338 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 SSX1Q16384 188 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 SLC38A6Q8IZM9 456 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 TMEM217Q8N7C4 229 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 ACOT13Q9NPJ3 140 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 SCN3BQ9NY72 215 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 SPATA2Q9UM82 520 aa11.35□□□□□ -0.59
CHMP3-202ENST00000393773 DEFA4P12838 97 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 CRHBPP24387 322 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 FCGR2BP31994 310 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-202ENST00000393773 OR2B8PP59922 312 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 NR2C2APQ86WQ0 139 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 TAS2R8Q9NYW2 309 aa11.34□□□□□ -0.59
CHMP3-202ENST00000393773 TRAV1-2A0A0B4J238 106 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PDCD5O14737 125 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 TGOLN2O43493 480 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 HRASP01112 189 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 CTXN2P0C2S0 81 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PRR20EP86478 221 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PRR20CP86479 221 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PRR20DP86480 221 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PRR20BP86481 221 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 PRR20AP86496 221 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 NUDCD2Q8WVJ2 157 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 MGLLQ99685 303 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 DAZ1Q9NQZ3 744 aaKnown RBP11.33□□□□□ -0.6
CHMP3-202ENST00000393773 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
CHMP3-202ENST00000393773 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
CHMP3-202ENST00000393773 METTL21EPA6NDL7 271 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 RGS10O43665 173 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 RPL35AP18077 110 aaKnown RBP11.32□□□□□ -0.6
CHMP3-202ENST00000393773 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■□□□□ 10.1
CHMP3-202ENST00000393773 ARL6IP1Q15041 203 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 HACD4Q5VWC8 232 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 CNIH2Q6PI25 160 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 PLET1Q6UQ28 207 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 DCSTAMPQ9H295 470 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 MAP6D1Q9H9H5 199 aa11.32□□□□□ -0.6
CHMP3-202ENST00000393773 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 TMEM235A6NFC5 223 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 SSX5O60225 188 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 CDNFQ49AH0 187 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
CHMP3-202ENST00000393773 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 TPRKBQ9Y3C4 175 aa11.31□□□□□ -0.6
CHMP3-202ENST00000393773 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHMP3-202ENST00000393773 TNFSF12O43508 249 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 RPA2P15927 270 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 RAB3BP20337 219 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 MYL9P24844 172 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 MSMO1Q15800 293 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 PRSS48Q7RTY5 328 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 BSCL2Q96G97 398 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-202ENST00000393773 ZNF414Q96IQ9 312 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
CHMP3-202ENST00000393773 VCXQ9H320 206 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 HRASLSQ9HDD0 168 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
CHMP3-202ENST00000393773 PKD1P98161 4303 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 F8W735 103 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-202ENST00000393773 NDUFA4O00483 81 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 EBAG9O00559 213 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 FGF2P09038 288 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 TAS2R31P59538 309 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 NANOS2P60321 138 aaKnown RBP11.29□□□□□ -0.6
CHMP3-202ENST00000393773 TBCEQ15813 527 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-202ENST00000393773 ZNF124Q15973 351 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 LAMTOR1Q6IAA8 161 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 OR5B3Q8NH48 314 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms