RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF705EA8MWA4 302 aaPredicted RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 TEX46H3BTG2 121 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 TIMM23O14925 209 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 IGLV2-23P01705 113 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 OR8U8P0C7N1 319 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 PAX1P15863 534 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 VDAC2P45880 294 aaPredicted RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 OR10P1Q8NGE3 313 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 OR4A5Q8NH83 315 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 TBX15Q96SF7 602 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 UNKLQ9H9P5 680 aaKnown RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 PLEKHA3Q9HB20 300 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 PFDN2Q9UHV9 154 aa6.97□□□□□ -1.29
TDP1-203ENST00000393454 MAP1AP78559 2803 aaPredicted RBP6.97□□□□□ -1.29
TDP1-203ENST00000393454 A0A1W2PPI3 338 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 CNTFRP26992 372 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 ATP6V0CP27449 155 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 HNF4GQ14541 408 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 PDLIM3Q53GG5 364 aaPredicted RBP6.96□□□□□ -1.29
TDP1-203ENST00000393454 TMEM167AQ8TBQ9 72 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 LRRC20Q8TCA0 184 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 ZNF257Q9Y2Q1 563 aa6.96□□□□□ -1.29
TDP1-203ENST00000393454 POLQO75417 2590 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 TNCP24821 2201 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 DOPEY2Q9Y3R5 2298 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 CELSR2Q9HCU4 2923 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 C15orf62A8K5M9 175 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 PRH1P02810 166 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 IFNA4P05014 189 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 SEC11BP0C7V7 166 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 CD24P25063 80 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 UBE2E1P51965 193 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 F2RL1P55085 397 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 RAB11AP62491 216 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 PRCDQ00LT1 54 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 HES1Q14469 280 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 TMEM182Q6ZP80 229 aaPredicted RBP6.96□□□□□ -1.3
TDP1-203ENST00000393454 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 OR1L8Q8NGR8 309 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 OR2G3Q8NGZ4 309 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 OR5B3Q8NH48 314 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 PINX1Q96BK5 328 aaKnown RBP6.96□□□□□ -1.3
TDP1-203ENST00000393454 ZNF430Q9H8G1 570 aaPredicted RBP6.96□□□□□ -1.3
TDP1-203ENST00000393454 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 METTL1Q9UBP6 276 aaKnown RBP6.96□□□□□ -1.3
TDP1-203ENST00000393454 POLR3KQ9Y2Y1 108 aaPredicted RBP6.96□□□□□ -1.3
TDP1-203ENST00000393454 RFNGQ9Y644 331 aa6.96□□□□□ -1.3
TDP1-203ENST00000393454 ABCA2Q9BZC7 2435 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 ABCA12Q86UK0 2595 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 UBE2L5PA0A1B0GUS4 154 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 RRHO14718 337 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 FGF16O43320 207 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 ACTL6BO94805 426 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 FAM157CP0CG43 387 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 SPP1P10451 314 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 SLC25A16P16260 332 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 S100A1P23297 94 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 CD1BP29016 333 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 SULT1A2P50226 295 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 GNB1P62873 340 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 RUNX1Q01196 453 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 PJVKQ0ZLH3 352 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 PLGLAQ15195 96 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 PSG5Q15238 335 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 ATP6V1FQ16864 119 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 MINOS1Q5TGZ0 78 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 HIST2H2BCQ6DN03 193 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 CCDC144NLQ6NUI1 221 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 STPG2Q8N412 459 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 TEX45Q8NA69 505 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 SLC24A4Q8NFF2 622 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 GNPNAT1Q96EK6 184 aaPredicted RBP6.95□□□□□ -1.3
TDP1-203ENST00000393454 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 MINOS1-NBL1R4GNA1 71 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
TDP1-203ENST00000393454 SMCO3A2RU48 225 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 VENTXO95231 258 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 NPY1RP25929 384 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 SNCAP37840 140 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 CAMLGP49069 296 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 PAX8Q06710 450 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 C10orf55Q5SWW7 151 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 DYNAPQ8N1N2 210 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 OR10W1Q8NGF6 305 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 C17orf50Q8WW18 174 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 TMEM147Q9BVK8 224 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 NDUFA4L2Q9NRX3 87 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 UQCC1Q9NVA1 299 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
TDP1-203ENST00000393454 TBL2Q9Y4P3 447 aaKnown RBP6.94□□□□□ -1.3
TDP1-203ENST00000393454 IGHV3OR16-10A0A075B7F0 116 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 SCAF4O95104 1147 aaKnown RBP6.94□□□□□ -1.3
TDP1-203ENST00000393454 MOSP00540 346 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms