RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CLDND2Q8NHS1 167 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 TIMD4Q96H15 378 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 OR8B2Q96RD0 313 aa16.33■□□□□ 0.2
PTPN11-202ENST00000392597 RRHO14718 337 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 KBTBD11O94819 623 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 NPBWR1P48145 328 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 PMS2P11Q13670 270 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 OR4C13Q8NGP0 309 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 RAB1CQ92928 201 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 LHX4Q969G2 390 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 UNKLQ9H9P5 680 aaKnown RBP16.32■□□□□ 0.2
PTPN11-202ENST00000392597 MALRD1Q5VYJ5 2156 aa16.32■□□□□ 0.2
PTPN11-202ENST00000392597 COL12A1Q99715 3063 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 H7C2Y5 167 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 HSPB1P04792 205 aaKnown RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 SOD3P08294 240 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 SAA1P0DJI8 122 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 RAB13P51153 203 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 ELLP55199 621 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 RPS16P62249 146 aaKnown RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 PRCDQ00LT1 54 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 SRSF1Q07955 248 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 ZNF787Q6DD87 383 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 OR5B3Q8NH48 314 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 FLYWCH2Q96CP2 140 aaKnown RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 NEIL1Q96FI4 390 aaPredicted RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 HARBI1Q96MB7 349 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 RARRES2Q99969 163 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 HELZ2Q9BYK8 2649 aaKnown RBP16.31■□□□□ 0.2
PTPN11-202ENST00000392597 LRRK2Q5S007 2527 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 NPY1RP25929 384 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 KHDC3LQ587J8 217 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 ACSM6Q6P461 480 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 SLC24A4Q8NFF2 622 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 OR4A5Q8NH83 315 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 TMEM170AQ8WVE7 144 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 WASHC3Q9Y3C0 194 aa16.31■□□□□ 0.2
PTPN11-202ENST00000392597 TSPAN4O14817 238 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 MC5RP33032 325 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 ICAM4Q14773 271 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 AVPI1Q5T686 147 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 WDR25Q64LD2 544 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-202ENST00000392597 TGIF2LXQ8IUE1 241 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 VSTM2AQ8TAG5 236 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 PLEKHA3Q9HB20 300 aa16.3■□□□□ 0.2
PTPN11-202ENST00000392597 NUPL2O15504 423 aaKnown RBP16.29■□□□□ 0.2
PTPN11-202ENST00000392597 PRRX1P54821 245 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 HAGHQ16775 308 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 RPP25LQ8N5L8 163 aaKnown RBP16.29■□□□□ 0.2
PTPN11-202ENST00000392597 IGHV2-26A0A0B4J1V2 119 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 PPIAL4CA0A0B4J2A2 164 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 hCG_1809904A0A1W2PP81 198 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 A0A1W2PPE2 198 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 A0A1W2PR64 198 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 A0A1W2PRV1 198 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 MAP1LC3B2A6NCE7 125 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 FNDC10F2Z333 226 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 IFNA4P05014 189 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 PPIAL4GP0DN37 164 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 USF1P22415 310 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-202ENST00000392597 REG1BP48304 166 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 SOHLH1Q5JUK2 328 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 FFAR4Q5NUL3 377 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 LCN15Q6UWW0 184 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 OR10G4Q8NGN3 311 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 MAP1LC3BQ9GZQ8 125 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 SLC39A9Q9NUM3 307 aa16.29■□□□□ 0.2
PTPN11-202ENST00000392597 HRNRQ86YZ3 2850 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-202ENST00000392597 TNCP24821 2201 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 CTXND1A0A1B0GTU2 59 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 LOC102723971A0A1B0GUV8 181 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 IGKV1D-33P01593 117 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 IGKV1-33P01594 117 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 IGLV1-47P01700 117 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 SSX7Q7RTT5 188 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 LY6G5BQ8NDX9 201 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 BEND2Q8NDZ0 799 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 CHODLQ9H9P2 273 aa16.28■□□□□ 0.2
PTPN11-202ENST00000392597 TEX50A0A1B0GTY4 177 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 SRP19P09132 144 aaKnown RBP16.27■□□□□ 0.2
PTPN11-202ENST00000392597 RNF224P0DH78 156 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 Q8N7P7 452 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 OR10G9Q8NGN4 311 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 OR10G7Q8NGN6 311 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 TMEM167AQ8TBQ9 72 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 CLEC7AQ9BXN2 247 aa16.27■□□□□ 0.2
PTPN11-202ENST00000392597 INS-IGF2F8WCM5 200 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 CA2P00918 260 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 OR13C7P0DN81 318 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 BCL2P10415 239 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 RPL8P62917 257 aaKnown RBP16.27■□□□□ 0.19
PTPN11-202ENST00000392597 DIAPH2-AS1Q14236 149 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 HLA-DRB5Q30154 266 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 ACOT6Q3I5F7 207 aaPredicted RBP16.27■□□□□ 0.19
PTPN11-202ENST00000392597 TREML4Q6UXN2 200 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 ACTR3CQ9C0K3 210 aaPredicted RBP16.27■□□□□ 0.19
PTPN11-202ENST00000392597 KCNIP2Q9NS61 270 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 GNG13Q9P2W3 67 aa16.27■□□□□ 0.19
PTPN11-202ENST00000392597 LRBAP50851 2863 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms