RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 GTF3AQ92664 365 aaKnown RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 ZDHHC8Q9ULC8 765 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 HAX1O00165 279 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SP9P0CG40 484 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 PF4V1P10720 104 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 CD33P20138 364 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 OR5P3Q8WZ94 311 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SNRNP40Q96DI7 357 aaKnown RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 PERPQ96FX8 193 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 WFDC1Q9HC57 220 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ACACBO00763 2458 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 IGKV3OR2-268A0A0C4DH90 116 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 PSMB2P49721 201 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 STARD6P59095 220 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 RPL30P62888 115 aaKnown RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 HGFACQ04756 655 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 P2RY6Q15077 328 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 C1orf185Q5T7R7 199 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 PNKDQ8N490 385 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 VSTM2AQ8TAG5 236 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 GDF15Q99988 308 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 THYN1Q9P016 225 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 HIGD1AQ9Y241 93 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1-12A0A0C4DH73 117 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 RBFOX2O43251 390 aaKnown RBP eCLIP4.22□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1D-12P01611 117 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ERVFRD-1P60508 538 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 CENPWQ5EE01 88 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 TMEM54Q969K7 222 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ADTRPQ96IZ2 230 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SSBP4Q9BWG4 385 aaPredicted RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 RNASE7Q9H1E1 156 aaKnown RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 PRR19A6NJB7 356 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 J3QRE1 110 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 CD8AP01732 235 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 MYOD1P15172 320 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 LOXL3P58215 753 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SERF2P84101 59 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 SRSF9Q13242 221 aaKnown RBP eCLIP4.22□□□□□ -1.73
LTN1-202ENST00000389194 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 OR4B1Q8NGF8 309 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ZNF524Q96C55 264 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 KCNS1Q96KK3 526 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 NABP2Q9BQ15 211 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 FBXL15Q9H469 300 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 AP5S1Q9NUS5 200 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 FNDC1Q4ZHG4 1894 aaPredicted RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 PRR33A8MZF0 331 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 M0QZ24 198 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 BRS3P32247 399 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 CEACAM3P40198 252 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 GNG5P63218 68 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 BMPERQ8N8U9 685 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
LTN1-202ENST00000389194 ZNF703Q9H7S9 590 aaPredicted RBP4.22□□□□□ -1.73
LTN1-202ENST00000389194 TMEM210A6NLX4 147 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 B4E171 279 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 CORTO00230 105 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 RPLP1P05386 114 aaKnown RBP4.21□□□□□ -1.73
LTN1-202ENST00000389194 C1QTNF9P0C862 333 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 IGHV1-2P23083 117 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 DDTP30046 118 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 SRP14P37108 136 aaKnown RBP4.21□□□□□ -1.73
LTN1-202ENST00000389194 TSPAN7P41732 249 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 CTAG1AP78358 180 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 FOXF2Q12947 444 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 HSPB7Q9UBY9 170 aa4.21□□□□□ -1.73
LTN1-202ENST00000389194 YTHDF2Q9Y5A9 579 aaKnown RBP4.21□□□□□ -1.73
LTN1-202ENST00000389194 KLF7O75840 302 aaPredicted RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 PMCHL1Q16048 86 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DMRTA2Q96SC8 542 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 LINC00527Q9UJ94 153 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 IGKV1-27A0A075B6S5 117 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 TGFAP01135 160 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 ZNF735P0CB33 412 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 GCSHP23434 173 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 FAM53AQ6NSI3 398 aaPredicted RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 MIR17HGQ75NE6 70 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 NFAM1Q8NET5 270 aaPredicted RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 AMMECR1Q9Y4X0 333 aaPredicted RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 WDR90Q96KV7 1748 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 A8MXK9 166 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 E9PLN8 166 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H1EP10412 219 aaKnown RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 IGFBP3P17936 291 aaPredicted RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 LCN2P80188 198 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 OR4A47Q6IF82 309 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 C9orf106Q8NAJ2 232 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DPF1Q92782 380 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 FGF11Q92914 225 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 CYYR1Q96J86 154 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms