RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 OLFM3Q96PB7 478 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 MS4A4EQ96PG1 132 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 SDF2Q99470 211 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 MRPL13Q9BYD1 178 aaKnown RBP0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 CTDSP1Q9GZU7 261 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 HDHD2Q9H0R4 259 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 KCNK15Q9H427 330 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 GLIPR2Q9H4G4 154 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 VSIRQ9H7M9 311 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 EMC7Q9NPA0 242 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 FAM118AQ9NWS6 357 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 CALYQ9NYX4 217 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 RPS6KB2Q9UBS0 482 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 POLR1DQ9Y2S0 133 aa0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 CHTOPQ9Y3Y2 248 aaKnown RBP0.22□□□□□ -2.37
RNU6-42P-201ENST00000384165 TRAV12-2A0A075B6T6 113 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TRAV27A0A087WT01 109 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 A0A087WUU8 490 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 MEIKINA0A087WXM9 373 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 LOC107984640A0A0U1RRK4 108 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 A0A1W2PNM2 257 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 GNG14A0A1W2PPG7 69 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TCRBV7S3A2A0A539 114 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 FAM90A26D6RGX4 464 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 H3BNX3 289 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 H7BYZ3 331 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SDCBPO00560 298 aaPredicted RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SH2D1BO14796 132 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 ARPC2O15144 300 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 CYB5BO43169 146 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 NUPR1O60356 82 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 FCGR3BO75015 233 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SRSF10O75494 262 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SPDEFO95238 335 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR2H2O95918 312 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 AGR2O95994 175 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 IFNB1P01574 187 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 IL1AP01583 271 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 HMGN2P05204 90 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 IFI6P09912 130 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 ARL14EPLP0DKL9 152 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 GZMBP10144 247 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 HLA-GP17693 338 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 PTBP1P26599 531 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 PRSS3P35030 304 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SLC15A1P46059 708 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 MAP2K3P46734 347 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 DAP3P51398 398 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 ZNF134P52741 427 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 RCN1Q15293 331 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TNXAQ16473 311 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SPINK13Q1W4C9 94 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TEX30Q5JUR7 227 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SPDYAQ5MJ70 313 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 HP1BP3Q5SSJ5 553 aaPredicted RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 GLYATL3Q5SZD4 288 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 KLC3Q6P597 504 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 ULK3Q6PHR2 472 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 AMTNQ6UX39 209 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TMPRSS11AQ6ZMR5 421 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 NOTCH2NLQ7Z3S9 236 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 ZNF573Q86YE8 665 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 CCDC50Q8IVM0 306 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 MMD2Q8IY49 270 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 FMR1NBQ8N0W7 255 aaPredicted RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 METTL4Q8N3J2 472 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TCAIMQ8N3R3 496 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 UBAC2Q8NBM4 344 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 FAM71CQ8NEG0 241 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR10W1Q8NGF6 305 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR5A2Q8NGI9 324 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR10G7Q8NGN6 311 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR52N1Q8NH53 320 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 COQ8AQ8NI60 647 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 PEX13Q92968 403 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SPTSSAQ969W0 71 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 MRPS24Q96EL2 167 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 SLC41A3Q96GZ6 507 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 COQ2Q96H96 371 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TMEM237Q96Q45 408 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 HDHD3Q9BSH5 251 aaPredicted RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 MRPL20Q9BYC9 149 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 RIBC2Q9H4K1 309 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 LRRC40Q9H9A6 602 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 RMND1Q9NWS8 449 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 TAS2R13Q9NYV9 303 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 OR5AC2Q9NZP5 309 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 KCNE5Q9UJ90 142 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 EXOGQ9Y2C4 368 aaKnown RBP0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 IFT52Q9Y366 437 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 U3KQE9 123 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 U3KQV3 271 aa0.21□□□□□ -2.38
RNU6-42P-201ENST00000384165 A0A075B6Q4 140 aa0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 LOC100131303A0A0U1RQF7 123 aa0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 EXOC1LA0A1B0GW35 172 aa0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 MFSD2BA6NFX1 497 aa0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 NCF1BA6NI72 391 aaPredicted RBP0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 NCF1CA8MVU1 366 aaPredicted RBP0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 HNRNPCL2B2RXH8 293 aa0.2□□□□□ -2.38
RNU6-42P-201ENST00000384165 M0R2Z0 102 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms