RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 SHISA3A0PJX4 238 aa11.9□□□□□ -0.51
SNPH-201ENST00000381867 ZNF146Q15072 292 aa11.9□□□□□ -0.51
SNPH-201ENST00000381867 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.51
SNPH-201ENST00000381867 ZNF826PQ6ZT77 177 aa11.9□□□□□ -0.51
SNPH-201ENST00000381867 GATAD1Q8WUU5 269 aa11.9□□□□□ -0.51
SNPH-201ENST00000381867 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.51
SNPH-201ENST00000381867 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
SNPH-201ENST00000381867 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 TUBA4BQ9H853 241 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
SNPH-201ENST00000381867 APC2O95996 2303 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 DNAJC13O75165 2243 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 ABHD12Q8N2K0 398 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 TTC9CQ8N5M4 171 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 GPR82Q96P67 336 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 ANKRD36A6QL64 1941 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 ELOVL5Q9NYP7 299 aa11.89□□□□□ -0.51
SNPH-201ENST00000381867 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
SNPH-201ENST00000381867 RNFT1Q5M7Z0 435 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 ITLN1Q8WWA0 313 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 IMMP1LQ96LU5 166 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 NPCDR1Q9BY65 106 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
SNPH-201ENST00000381867 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 MRPL16Q9NX20 251 aaKnown RBP11.88□□□□□ -0.51
SNPH-201ENST00000381867 CGB1A6NKQ9 187 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 WNT9BO14905 357 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 ASPHD2Q6ICH7 369 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 FLVCR1-AS1Q8TAF5 88 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 GREB1Q4ZG55 1949 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 RNF222A6NCQ9 220 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 ZIC3O60481 467 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 SGK494Q96LW2 274 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 HILPDAQ9Y5L2 63 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 LOC390937A0A1W2PQ73 354 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 RRHO14718 337 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 IL6RP08887 468 aaPredicted RBP11.88□□□□□ -0.51
SNPH-201ENST00000381867 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
SNPH-201ENST00000381867 ATP1A1-AS1Q5TC04 95 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 RTN4RQ9BZR6 473 aa11.88□□□□□ -0.51
SNPH-201ENST00000381867 NYNRINQ9P2P1 1898 aaKnown RBP11.87□□□□□ -0.51
SNPH-201ENST00000381867 A0A0G2JK05 382 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 CTSBP07858 339 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 PTGDSP41222 190 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 CDCP2Q5VXM1 449 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
SNPH-201ENST00000381867 ATP5J2P56134 94 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 PAPPA-AS1Q5QFB9 102 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
SNPH-201ENST00000381867 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 KIR2DL4Q99706 377 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 TMEM160Q9NX00 188 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 TRAV8-6A0A0B4J262 113 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 CD59P13987 128 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 GPX4P36969 197 aaPredicted RBP11.87□□□□□ -0.51
SNPH-201ENST00000381867 MEIG1Q5JSS6 88 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 SPCS1Q9Y6A9 102 aa11.87□□□□□ -0.51
SNPH-201ENST00000381867 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 MOB4Q9Y3A3 225 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 CHCHD2Q9Y6H1 151 aaPredicted RBP11.86□□□□□ -0.51
SNPH-201ENST00000381867 H3BTX0 84 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 C10orf128Q5T292 105 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 ZNF703Q9H7S9 590 aaPredicted RBP11.86□□□□□ -0.51
SNPH-201ENST00000381867 SCN3AQ9NY46 2000 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 VWA8A3KMH1 1905 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 TFPI2P48307 235 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 TNFSF10P50591 281 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 PSMG4Q5JS54 123 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 SAPCD1Q5SSQ6 148 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 TRAV14DV4A0A0A6YYC5 116 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 SLC17A3O00476 420 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 RAB9AP51151 201 aa11.86□□□□□ -0.51
SNPH-201ENST00000381867 RNASE1P07998 156 aaKnown RBP11.85□□□□□ -0.51
SNPH-201ENST00000381867 NRN1LQ496H8 165 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 DNAL4O96015 105 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms