RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CR1LQ2VPA4 569 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 FAM90A2PQ658T7 463 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 LCN15Q6UWW0 184 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 TCF23Q7RTU1 214 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 OR51H1Q8NH63 302 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 GPR146Q96CH1 333 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 PRDM13Q9H4Q3 707 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 NCOR1P1Q9H4R4 102 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 RPRMQ9NS64 109 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 OR2W1Q9Y3N9 320 aa10.21□□□□□ -0.77
CIITA-202ENST00000381835 RBM7Q9Y580 266 aaKnown RBP10.21□□□□□ -0.77
CIITA-202ENST00000381835 A0A1B0GU03 582 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 NPIPB11E5RHQ5 1161 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 BCL2P10415 239 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 C17orf58Q2M2W7 97 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 RAB40CQ96S21 281 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 TMEM242Q9NWH2 141 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 GNG12Q9UBI6 72 aa10.21□□□□□ -0.78
CIITA-202ENST00000381835 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 TGOLN2O43493 480 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 CGB3P0DN86 165 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 CGB7P0DN87 165 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 FGF8P55075 233 aaPredicted RBP10.2□□□□□ -0.78
CIITA-202ENST00000381835 IZUMO4Q1ZYL8 232 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 TMEM155Q4W5P6 130 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 OR8B3Q8NGG8 313 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 OR8B2Q96RD0 313 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 VSIRQ9H7M9 311 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 CLN8Q9UBY8 286 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 LINC00312Q9Y6C7 94 aa10.2□□□□□ -0.78
CIITA-202ENST00000381835 FASNP49327 2511 aaKnown RBP10.2□□□□□ -0.78
CIITA-202ENST00000381835 IGHV3-7P01780 117 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 CCL3L1P16619 93 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 RND2P52198 227 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 ATP5J2P56134 94 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 TMEM200BQ69YZ2 307 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 ZNF841Q6ZN19 808 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 NEIL1Q96FI4 390 aaPredicted RBP10.19□□□□□ -0.78
CIITA-202ENST00000381835 RHOVQ96L33 236 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 PIGBOS1A0A0B4J2F0 54 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 WNT2P09544 360 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 IAPPP10997 89 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 HTD2P86397 168 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 MEF2CQ06413 473 aaPredicted RBP10.19□□□□□ -0.78
CIITA-202ENST00000381835 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 CORO2AQ92828 525 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 PERPQ96FX8 193 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 BPESC1Q9GZL8 116 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 SDF2L1Q9HCN8 221 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 RNF150Q9ULK6 438 aa10.19□□□□□ -0.78
CIITA-202ENST00000381835 KIAA1324LA8MWY0 1029 aaPredicted RBP10.18□□□□□ -0.78
CIITA-202ENST00000381835 METTL15P1P0C7V9 234 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 SLC25A6P12236 298 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 KRTAP10-9P60411 292 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 RAB4BP61018 213 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 GAMTQ14353 236 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 ZNF714Q96N38 554 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 PATZ1Q9HBE1 687 aaKnown RBP10.18□□□□□ -0.78
CIITA-202ENST00000381835 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 KCNS2Q9ULS6 477 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 CEBPZOSA8MTT3 80 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 F2RL2O00254 374 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 SYNGR2O43760 224 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 MMP23AO75900 390 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 OPN1MWP04001 364 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 LOXL3P58215 753 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 CD81P60033 236 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 PRAMEF5Q5TYX0 476 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 WDR25Q64LD2 544 aaPredicted RBP10.18□□□□□ -0.78
CIITA-202ENST00000381835 Q6ZRM9 215 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 P2RX4Q99571 388 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 GAL3ST2Q9H3Q3 398 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 RAB9BQ9NP90 201 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 VAX2Q9UIW0 290 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 JPT1Q9UK76 154 aa10.18□□□□□ -0.78
CIITA-202ENST00000381835 IFNA1P01562 189 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 PDLIM4P50479 330 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 GNB2P62879 340 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 C21orf62-AS1Q17RA5 79 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 MORN2Q502X0 79 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 UTF1Q5T230 341 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 SSX7Q7RTT5 188 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 RCC1LQ96I51 464 aaKnown RBP10.17□□□□□ -0.78
CIITA-202ENST00000381835 C14orf144Q96I85 54 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
CIITA-202ENST00000381835 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
CIITA-202ENST00000381835 IDI2-AS1Q9NZ38 188 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 SMCO3A2RU48 225 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 PKIAP61925 76 aa10.17□□□□□ -0.78
CIITA-202ENST00000381835 HBG1P69891 147 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms