RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 LOC102723971A0A1B0GUV8 181 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 C17orf112F2Z3M2 114 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 KBTBD11O94819 623 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 SRP19P09132 144 aaKnown RBP15.64■□□□□ 0.09
GMDS-201ENST00000380805 SAA1P0DJI8 122 aaPredicted RBP15.64■□□□□ 0.09
GMDS-201ENST00000380805 ATP5IP56385 69 aaPredicted RBP15.64■□□□□ 0.09
GMDS-201ENST00000380805 RAB11AP62491 216 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 ZNF787Q6DD87 383 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 RPP25LQ8N5L8 163 aaKnown RBP15.64■□□□□ 0.09
GMDS-201ENST00000380805 OR5B3Q8NH48 314 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 UNKLQ9H9P5 680 aaKnown RBP15.64■□□□□ 0.09
GMDS-201ENST00000380805 FKBP11Q9NYL4 201 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 OR51B2Q9Y5P1 312 aa15.64■□□□□ 0.09
GMDS-201ENST00000380805 TSPAN4O14817 238 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 NUPL2O15504 423 aaKnown RBP15.63■□□□□ 0.09
GMDS-201ENST00000380805 ABHD12Q8N2K0 398 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 SLC24A4Q8NFF2 622 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 COL12A1Q99715 3063 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 A0A1W2PPH5 198 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 FNDC10F2Z333 226 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 INS-IGF2F8WCM5 200 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 ELLP55199 621 aaPredicted RBP15.63■□□□□ 0.09
GMDS-201ENST00000380805 RPS16P62249 146 aaKnown RBP15.63■□□□□ 0.09
GMDS-201ENST00000380805 OR4C13Q8NGP0 309 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 OR4A5Q8NH83 315 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 MIOXQ9UGB7 285 aa15.63■□□□□ 0.09
GMDS-201ENST00000380805 CTXND1A0A1B0GTU2 59 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 MAP1LC3B2A6NCE7 125 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 IGLV1-47P01700 117 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 NPY1RP25929 384 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 IL3RAP26951 378 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 SRSF1Q07955 248 aaKnown RBP eCLIP15.62■□□□□ 0.09
GMDS-201ENST00000380805 HAGHQ16775 308 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 BSXQ3C1V8 233 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 LY6G5BQ8NDX9 201 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 ITLN2Q8WWU7 325 aaPredicted RBP15.62■□□□□ 0.09
GMDS-201ENST00000380805 FLYWCH2Q96CP2 140 aaKnown RBP15.62■□□□□ 0.09
GMDS-201ENST00000380805 HARBI1Q96MB7 349 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 MAP1LC3BQ9GZQ8 125 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 WASHC3Q9Y3C0 194 aa15.62■□□□□ 0.09
GMDS-201ENST00000380805 SOD3P08294 240 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 BCL2P10415 239 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 PAX6P26367 422 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 RAB13P51153 203 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 WDR25Q64LD2 544 aaPredicted RBP15.61■□□□□ 0.09
GMDS-201ENST00000380805 TREML4Q6UXN2 200 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 CBLN2Q8IUK8 224 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 ZNF709Q8N972 641 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 TMEM167AQ8TBQ9 72 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 LHX4Q969G2 390 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 NEIL1Q96FI4 390 aaPredicted RBP15.61■□□□□ 0.09
GMDS-201ENST00000380805 ENY2Q9NPA8 101 aa15.61■□□□□ 0.09
GMDS-201ENST00000380805 LSM4Q9Y4Z0 139 aaKnown RBP15.61■□□□□ 0.09
GMDS-201ENST00000380805 LOC105371267A0A1B0GV96 52 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 J3QKU1 62 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 NDUFS6O75380 124 aaKnown RBP15.6■□□□□ 0.09
GMDS-201ENST00000380805 MC5RP33032 325 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 DIAPH2-AS1Q14236 149 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 SOHLH1Q5JUK2 328 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 FFAR4Q5NUL3 377 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 TMEM88Q6PEY1 159 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 LCN15Q6UWW0 184 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 TGIF2LXQ8IUE1 241 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 BEND2Q8NDZ0 799 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 OR8B3Q8NGG8 313 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 VSTM2AQ8TAG5 236 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 OR8B2Q96RD0 313 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 PLEKHA3Q9HB20 300 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 IGHV2-26A0A0B4J1V2 119 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 TEX50A0A1B0GTY4 177 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 H7C2Y5 167 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 USF1P22415 310 aaPredicted RBP15.6■□□□□ 0.09
GMDS-201ENST00000380805 OPRK1P41145 380 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 OR10G9Q8NGN4 311 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 OR10G7Q8NGN6 311 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 C17orf50Q8WW18 174 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 RAB1CQ92928 201 aa15.6■□□□□ 0.09
GMDS-201ENST00000380805 TENM4Q6N022 2769 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 ABCA4P78363 2273 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 USP9XQ93008 2570 aaPredicted RBP15.59■□□□□ 0.09
GMDS-201ENST00000380805 SEC14L6B5MCN3 397 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 CA2P00918 260 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 IGLV2-23P01705 113 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 RNF224P0DH78 156 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 OR13C7P0DN81 318 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 RHEBQ15382 184 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 TMEM249Q2WGJ8 235 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 HLA-DRB5Q30154 266 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 AWAT1Q58HT5 328 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 AVPI1Q5T686 147 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 TIMD4Q96H15 378 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 P2RX4Q99571 388 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 SLC39A9Q9NUM3 307 aa15.59■□□□□ 0.09
GMDS-201ENST00000380805 PPIAL4CA0A0B4J2A2 164 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 PPIAL4GP0DN37 164 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 MYOD1P15172 320 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 REG1BP48304 166 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 ACOT6Q3I5F7 207 aaPredicted RBP15.58■□□□□ 0.08
GMDS-201ENST00000380805 C2orf83Q53S99 150 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 RXFP4Q8TDU9 374 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms