RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 RBFOX2O43251 390 aaKnown RBP eCLIP13□□□□□ -0.331e-18■□□□□ 8.3
HMGN1-204ENST00000380749 NDUFB8O95169 186 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 ATP6V1G2O95670 118 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 FAM106AQ4KMX7 169 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 LINC00322Q6ZN03 302 aaPredicted RBP13□□□□□ -0.33
HMGN1-204ENST00000380749 SLC16A13Q7RTY0 426 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 DEFB125Q8N687 156 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 GVQW1Q8N7I0 195 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 OR5H6Q8NGV6 325 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 CXorf58Q96LI9 332 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 SLC5A7Q9GZV3 580 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 HIPK2Q9H2X6 1198 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 S4R3C0 116 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 BIRC6Q9NR09 4857 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 A8MWP6 167 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 OR11H12B2RN74 326 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 CLEC2LP0C7M8 214 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 EDN2P20800 178 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 TAS2R31P59538 309 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 FXYD4P59646 89 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 CACNG8Q8WXS5 425 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-204ENST00000380749 FAM110AQ9BQ89 295 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 WFDC10AQ9H1F0 79 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
HMGN1-204ENST00000380749 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 SULT1C2O00338 296 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 REG1AP05451 166 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 PTHLHP12272 177 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 NQO2P16083 231 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 CBLN1P23435 193 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 CBX5P45973 191 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 KLK9Q2XQG4 91 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 ZNF57Q68EA5 555 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-204ENST00000380749 BORCS5Q969J3 196 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 AUNIPQ9H7T9 357 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 KLK9Q9UKQ9 250 aa12.98□□□□□ -0.33
HMGN1-204ENST00000380749 TMEM213A2RRL7 107 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 HPRT1P00492 218 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 MYOD1P15172 320 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 OR2B8PP59922 312 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 HERV-K104P61576 105 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 OR51H1Q8NH63 302 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
HMGN1-204ENST00000380749 RNF167Q9H6Y7 350 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 THYN1Q9P016 225 aa12.97□□□□□ -0.33
HMGN1-204ENST00000380749 RBMY1BA6NDE4 496 aaKnown RBP12.96□□□□□ -0.33
HMGN1-204ENST00000380749 RBMY1EA6NEQ0 496 aaKnown RBP12.96□□□□□ -0.33
HMGN1-204ENST00000380749 MFSD2BA6NFX1 497 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 CYB5BO43169 146 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 TMEM127O75204 238 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 JTBO76095 146 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 FCER2P06734 321 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 FGF2P09038 288 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 RBMY1DP0C7P1 496 aaKnown RBP12.96□□□□□ -0.33
HMGN1-204ENST00000380749 NEDD8Q15843 81 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 ANKRD55Q3KP44 614 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 THOC7Q6I9Y2 204 aaKnown RBP12.96□□□□□ -0.33
HMGN1-204ENST00000380749 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 OR5AP2Q8NGF4 316 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 OR52B4Q8NGK2 314 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 COMMD9Q9P000 198 aa12.96□□□□□ -0.33
HMGN1-204ENST00000380749 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 CGB1A6NKQ9 187 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 GPR183P32249 361 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 ERVK-16P61578 105 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 ZNF818PQ6ZRF7 136 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 GIMAP1Q8WWP7 306 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 QTRT1Q9BXR0 403 aaKnown RBP12.95□□□□□ -0.34
HMGN1-204ENST00000380749 PLEKHA2Q9HB19 425 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 MLXQ9UH92 298 aa12.95□□□□□ -0.34
HMGN1-204ENST00000380749 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 UPK2O00526 184 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 S1PR2O95136 353 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 CLEC3BP05452 202 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 CROCCP3Q8IVE0 287 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 TRAV3A0A0B4J244 114 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 SCAF4O95104 1147 aaKnown RBP12.94□□□□□ -0.34
HMGN1-204ENST00000380749 PLET1Q6UQ28 207 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 HSD17B13Q7Z5P4 300 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-204ENST00000380749 ZNF502Q8TBZ5 544 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 UFC1Q9Y3C8 167 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 SELENOKQ9Y6D0 94 aa12.94□□□□□ -0.34
HMGN1-204ENST00000380749 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
HMGN1-204ENST00000380749 XRCC3O43542 346 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms