RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SPSB4Q96A44 273 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 SSBP3Q9BWW4 388 aaPredicted RBP9.54□□□□□ -0.88
SMAD9-202ENST00000379826 J3QR06 171 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 EREGO14944 169 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 SRIP30626 198 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 SUB1P53999 127 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 SIAH2O43255 324 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 SERF1AO75920 110 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 BRS3P32247 399 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 RPL31P62899 125 aaKnown RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 OR4C5Q8NGB2 326 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 MAP1BP46821 2468 aaKnown RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 IBA57Q5T440 356 aaKnown RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ETFRF1Q6IPR1 90 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 OR2D3Q8NGH3 330 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF418Q8TF45 676 aaPredicted RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 HTTP42858 3142 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 GATA2P23769 480 aaPredicted RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ACP7Q6ZNF0 438 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 IGKV1-39P01597 117 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 IGKV1D-39P04432 117 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF137PP52743 207 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 CENPWQ5EE01 88 aa9.53□□□□□ -0.88
SMAD9-202ENST00000379826 IGFBP2P18065 325 aa9.52□□□□□ -0.88
SMAD9-202ENST00000379826 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF124Q15973 351 aa9.52□□□□□ -0.88
SMAD9-202ENST00000379826 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 TMPRSS2O15393 492 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 TCTAP57738 103 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 TNFAIP6P98066 277 aaPredicted RBP9.52□□□□□ -0.89
SMAD9-202ENST00000379826 PSG7Q13046 419 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 SRSF7Q16629 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMAD9-202ENST00000379826 FAM201AQ5SY85 155 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 INO80CQ6PI98 192 aaPredicted RBP9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CRIP3Q6Q6R5 217 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 IFNL4K9M1U5 179 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CA2P00918 260 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CSN3P07498 182 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 MIR17HGQ75NE6 70 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 ZNF596Q8TC21 504 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 BCL2L2Q92843 193 aaPredicted RBP9.52□□□□□ -0.89
SMAD9-202ENST00000379826 C5orf42Q9H799 3197 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CT45A6P0DMU7 189 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CT45A5P0DMU8 189 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CT45A7P0DMV0 189 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CT45A1Q5HYN5 189 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 CT45A3Q8NHU0 189 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 OR2V2Q96R30 315 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 IL19Q9UHD0 177 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 TCF19Q9Y242 345 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 LAMA3Q16787 3333 aa9.52□□□□□ -0.89
SMAD9-202ENST00000379826 FOXH1O75593 365 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 LCN2P80188 198 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 GTF3AQ92664 365 aaKnown RBP9.51□□□□□ -0.89
SMAD9-202ENST00000379826 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
SMAD9-202ENST00000379826 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 IGKV1D-33P01593 117 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 IGKV1-33P01594 117 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 SLC35E4Q6ICL7 350 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 NUP37Q8NFH4 326 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 PRDM13Q9H4Q3 707 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 KNTC1P50748 2209 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 PSPNO60542 156 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 AMY1AP04745 511 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 Q6P435 159 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 MPDU1O75352 247 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 C10orf113Q5VZT2 155 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 CCL13Q99616 98 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 HES4Q9HCC6 221 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 HSPB7Q9UBY9 170 aa9.51□□□□□ -0.89
SMAD9-202ENST00000379826 SH2D7A6NKC9 451 aaPredicted RBP9.5□□□□□ -0.89
SMAD9-202ENST00000379826 PRB1P04280 392 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 RND2P52198 227 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 NRN1LQ496H8 165 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 SP5Q6BEB4 398 aaPredicted RBP9.5□□□□□ -0.89
SMAD9-202ENST00000379826 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 TBL2Q9Y4P3 447 aaKnown RBP9.5□□□□□ -0.89
SMAD9-202ENST00000379826 GFRA1P56159 465 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 LY6G6EA0A0G2JKS1 128 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 IGHV1-2P23083 117 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 C12orf54Q6X4T0 127 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 U3KQA8 63 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 CNIH1O95406 144 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 MFAP2P55001 183 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms